MetaCyc Pathway: indole-3-acetate biosynthesis VI (bacteria) in Pseudomonas fluorescens FW300-N2E2

Add experiment(s):


Aspartate transaminase:
L-tryptophan + 2-oxoglutarate→(indol-3-yl)pyruvate + L-glutamate (EC 2.6.1.1; 2.6.1.27)
Pf6N2E2_1496
Pf6N2E2_2127
Pf6N2E2_2446
Pf6N2E2_2632
Pf6N2E2_3173
Pf6N2E2_4288
Pf6N2E2_4386
Pf6N2E2_462
Pf6N2E2_5300
Pf6N2E2_5813
Pf6N2E2_5890
Pf6N2E2_5891
Pf6N2E2_5895
Pf6N2E2_5989
Pf6N2E2_637
Pf6N2E2_684
Indolepyruvate decarboxylase:
(indol-3-yl)pyruvate + H+→(indol-3-yl)acetaldehyde + CO2 (EC 4.1.1.74)
No genes
Indole-3-acetaldehyde oxidase:
(indol-3-yl)acetaldehyde + dioxygen + H2O→(indol-3-yl)acetate + hydrogen peroxide + H+ (EC 1.2.3.7)
No genes

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information