MetaCyc Pathway: superpathway of plastoquinol biosynthesis in Pseudomonas fluorescens FW300-N2E2

Add experiment(s):


geranyl diphosphate + 7 3-methylbut-3-en-1-yl diphosphate→all-trans-nonaprenyl diphosphate + 7 diphosphate (EC 2.5.1.84)
No genes
Aspartate transaminase:
L-tyrosine + 2-oxoglutarate→3-(4-hydroxyphenyl)pyruvate + L-glutamate (EC 2.6.1.1; 2.6.1.27; 2.6.1.5; 2.6.1.57)
Pf6N2E2_1496
Pf6N2E2_2127
Pf6N2E2_2446
Pf6N2E2_2519
Pf6N2E2_2632
Pf6N2E2_3173
Pf6N2E2_3251
Pf6N2E2_4288
Pf6N2E2_4386
Pf6N2E2_462
Pf6N2E2_50
Pf6N2E2_5300
Pf6N2E2_5813
Pf6N2E2_5890
Pf6N2E2_5891
Pf6N2E2_5895
Pf6N2E2_5989
Pf6N2E2_637
Pf6N2E2_684
4-hydroxyphenylpyruvate dioxygenase:
3-(4-hydroxyphenyl)pyruvate + dioxygen→homogentisate + CO2 (EC 1.13.11.27)
Pf6N2E2_1001
Pf6N2E2_456
Pf6N2E2_5058
Pf6N2E2_988
all-trans-nonaprenyl diphosphate + homogentisate + H+→2-methyl-6-all-trans-nonaprenyl-1,4-benzoquinol + CO2 + diphosphate (EC 2.5.1.117)
No genes
2-methyl-6-all-trans-nonaprenyl-1,4-benzoquinol + S-adenosyl-L-methionine→plastoquinol-9 + S-adenosyl-L-homocysteine + H+ (EC 2.1.1.295)
No genes

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information