MetaCyc Pathway: putrescine biosynthesis I in Pseudomonas fluorescens FW300-N2E2
| Arginine decarboxylase: L-arginine + H+→agmatine + CO2 (EC 4.1.1.19) |
| Pf6N2E2 |
| Pf6N2E2 |
| Agmatinase: agmatine + H2O→putrescine + urea (EC 3.5.3.11) |
| Pf6N2E2 |
Links:
- Pathway details at MetaCyc
- Fitness data for 3 genes
- All MetaCyc pathways for Pseudomonas fluorescens FW300-N2E2
Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information