MetaCyc Pathway: aerobic respiration I (cytochrome c) in Pseudomonas fluorescens FW300-N2E2

Add experiment(s):


NADH[in] + 5 H+[in] + a ubiquinone→a ubiquinol + NAD+[in] + 4 H+[out] (EC 7.1.1.2)
Pf6N2E2_1255
Pf6N2E2_265
Pf6N2E2_266
Pf6N2E2_267
Pf6N2E2_268
Pf6N2E2_269
Pf6N2E2_270
Pf6N2E2_271
Pf6N2E2_272
Pf6N2E2_273
Pf6N2E2_274
Pf6N2E2_275
Pf6N2E2_276
Pf6N2E2_277
Pf6N2E2_5132
Pf6N2E2_926
Succinate dehydrogenase (ubiquinone):
succinate[in] + a ubiquinone→a ubiquinol + fumarate[in] (EC 1.3.5.1)
Pf6N2E2_5853
a ubiquinol + 2 an oxidized c-type cytochrome[out] + 2 H+[in]→2 a reduced c-type cytochrome[out] + 4 H+[out] + a ubiquinone (EC 7.1.1.8)
No genes
4 a reduced c-type cytochrome[out] + dioxygen[in] + 8 H+[in]→2 H2O[in] + 4 an oxidized c-type cytochrome[out] + 4 H+[out] (EC 7.1.1.9)
Pf6N2E2_1254
Pf6N2E2_1858
Pf6N2E2_1871
Pf6N2E2_2305
Pf6N2E2_2306
Pf6N2E2_2307
Pf6N2E2_2308
Pf6N2E2_2310
Pf6N2E2_2311
Pf6N2E2_2312
Pf6N2E2_2313
Pf6N2E2_4098
Pf6N2E2_4099
Pf6N2E2_4101

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information