MetaCyc Pathway: aerobic respiration II (cytochrome c) (yeast) in Pseudomonas fluorescens FW300-N2C3

Add experiment(s):


NADH[in] + H+[in] + a ubiquinone→a ubiquinol + NAD+[in] (EC 1.6.5.9)
AO356_15965
AO356_24510
Succinate dehydrogenase (ubiquinone):
succinate[in] + a ubiquinone→a ubiquinol + fumarate[in] (EC 1.3.5.1)
AO356_19685
a ubiquinol + 2 an oxidized c-type cytochrome[out] + 2 H+[in]→2 a reduced c-type cytochrome[out] + 4 H+[out] + a ubiquinone (EC 7.1.1.8)
No genes
4 a reduced c-type cytochrome[out] + dioxygen[in] + 8 H+[in]→2 H2O[in] + 4 an oxidized c-type cytochrome[out] + 4 H+[out] (EC 7.1.1.9)
AO356_02405
AO356_02410
AO356_02415
AO356_02420
AO356_02425
AO356_02430
AO356_02435
AO356_02440
AO356_11160
AO356_11165
AO356_11175

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information