MetaCyc Pathway: D-galacturonate degradation I in Pseudomonas fluorescens FW300-N2C3

Add experiment(s):


Glucuronate isomerase:
aldehydo-D-galacturonate→D-tagaturonate
(EC 5.3.1.12)
No genes
Tagaturonate reductase (in reverse):
D-tagaturonate + NADH + H+→D-altronate + NAD+
(EC 1.1.1.58)
No genes
Altronate dehydratase:
D-altronate→2-dehydro-3-deoxy-D-gluconate + H2O
(EC 4.2.1.7)
AO356_24195
AO356_27460
2-dehydro-3-deoxy-D-gluconate + ATP→2-dehydro-3-deoxy-D-gluconate 6-phosphate + ADP + H+ (EC 2.7.1.178; 2.7.1.45)
AO356_00445
AO356_28555
2-dehydro-3-deoxy-phosphogluconate aldolase:
2-dehydro-3-deoxy-D-gluconate 6-phosphate→D-glyceraldehyde 3-phosphate + pyruvate
(EC 4.1.2.14; 4.1.2.55)
AO356_05150

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information