MetaCyc Pathway: superpathway of allantoin degradation in yeast in Pseudomonas fluorescens FW300-N2C3

Add experiment(s):


Allantoinase:
(S)-(+)-allantoin + H2O→allantoate + H+ (EC 3.5.2.5)
AO356_19460
Urea carboxylase:
CO2 + urea + ATP + H2O→urea-1-carboxylate + ADP + 2 H+ + phosphate (EC 6.3.4.6)
AO356_04670
Allantoicase:
allantoate + H2O→(S)-ureidoglycolate + urea (EC 3.5.3.4)
AO356_19450
Allophanate hydrolase:
urea-1-carboxylate + H2O→2 carbamate + H+ (EC 3.5.1.54)
AO356_04325
AO356_04330
AO356_04675
AO356_07585
AO356_07590
carbamate + 2 H+→CO2 + ammonium (spontaneous) (EC 3.5.1.110; 3.5.1.20; 3.5.1.54; 4.2.1.104)
AO356_04325
AO356_04330
AO356_04675
AO356_07585
AO356_07590
AO356_23790
Ureidoglycolate lyase:
(S)-ureidoglycolate→glyoxylate + urea (EC 4.3.2.3)
AO356_19445

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information