MetaCyc Pathway: (8E,10E)-dodeca-8,10-dienol biosynthesis in Pseudomonas fluorescens FW300-N1B4

Add experiment(s):


palmitoyl-CoA[in] + an oxidized electron-transfer flavoprotein[in] + H+[in]→(2E)-hexadec-2-enoyl-CoA[in] + a reduced electron-transfer flavoprotein[in] (EC 1.3.8.9)
No genes
(8E,10E)-dodeca-8,10-dienoate + 2 NADPH + 3 H+→(8E,10E)-dodeca-8,10-dienol + 2 NADP+ + H2O
No genes
Enoyl-CoA hydratase (in reverse):
(2E)-hexadec-2-enoyl-CoA + H2O→(S)-3-hydroxyhexadecanoyl-CoA
(EC 4.2.1.17)
Pf1N1B4_1787
Pf1N1B4_267
Pf1N1B4_3308
Pf1N1B4_3796
Pf1N1B4_3800
Pf1N1B4_3903
Pf1N1B4_4777
Pf1N1B4_4788
Pf1N1B4_4790
Pf1N1B4_5593
Pf1N1B4_679
Long-chain-3-hydroxyacyl-CoA dehydrogenase:
(S)-3-hydroxyhexadecanoyl-CoA + NAD+→3-oxopalmitoyl-CoA + NADH + H+
(EC 1.1.1.211)
Pf1N1B4_1787
Pf1N1B4_3796
Pf1N1B4_3903
Acetyl-CoA C-myristoyltransferase (in reverse):
3-oxopalmitoyl-CoA + coenzyme A→myristoyl-CoA + acetyl-CoA
(EC 2.3.1.155)
Pf1N1B4_371
Pf1N1B4_4786
Pf1N1B4_5589
myristoyl-CoA + an oxidized electron-transfer flavoprotein + H+→(2E)-tetradec-2-enoyl-CoA + a reduced electron-transfer flavoprotein (EC 1.3.8.8)
No genes
Enoyl-CoA hydratase (in reverse):
(2E)-tetradec-2-enoyl-CoA + H2O→(S)-3-hydroxytetradecanoyl-CoA
(EC 4.2.1.17)
Pf1N1B4_1787
Pf1N1B4_267
Pf1N1B4_3308
Pf1N1B4_3796
Pf1N1B4_3800
Pf1N1B4_3903
Pf1N1B4_4777
Pf1N1B4_4788
Pf1N1B4_4790
Pf1N1B4_5593
Pf1N1B4_679
(S)-3-hydroxytetradecanoyl-CoA + NAD+→3-oxomyristoyl-CoA + NADH + H+
Pf1N1B4_1787
Pf1N1B4_3796
Pf1N1B4_3903
Acetyl-CoA C-acyltransferase (in reverse):
3-oxomyristoyl-CoA + coenzyme A→lauroyl-CoA + acetyl-CoA
(EC 2.3.1.16)
Pf1N1B4_1270
Pf1N1B4_3234
Pf1N1B4_371
Pf1N1B4_3795
Pf1N1B4_3904
Pf1N1B4_4786
Pf1N1B4_5133
Pf1N1B4_5589
Pf1N1B4_5835
lauroyl-CoA + 2 a ferrocytochrome b5 + dioxygen + 2 H+→(9E)-dodecenoyl-CoA + 2 a ferricytochrome b5 + 2 H2O
No genes
(9E)-dodecenoyl-CoA + 2 a ferrocytochrome b5 + dioxygen + 2 H+→(8E,10E)-dodeca-8,10-dienoyl-CoA + 2 a ferricytochrome b5 + 2 H2O
No genes

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information