MetaCyc Pathway: superpathway of fatty acid biosynthesis II (plant) in Azospirillum brasilense Sp245

Add experiment(s):


acetyl-CoA + a [carboxyl-carrier protein dimer]-N6-carboxybiotinyl-L-lysine→malonyl-CoA + a [biotin carboxyl-carrier-protein dimer]-N6-biotinyl-L-lysine (EC 2.1.3.15)
AZOBR_RS03260
[Acyl-carrier-protein] S-malonyltransferase:
malonyl-CoA + a soluble [acyl-carrier protein]→a malonyl-[acp] + coenzyme A (EC 2.3.1.39)
AZOBR_RS08385
Beta-ketoacyl-acyl-carrier-protein synthase III:
acetyl-CoA + a malonyl-[acp] + H+→an acetoacetyl-[acp] + CO2 + coenzyme A (EC 2.3.1.180)
AZOBR_RS10090
AZOBR_RS21535
3-oxoacyl-[acyl-carrier-protein] reductase (in reverse):
an acetoacetyl-[acp] + NADPH + H+→a (3R)-3-hydroxybutanoyl-[acp] + NADP+ (EC 1.1.1.100)
AZOBR_RS04635
AZOBR_RS04695
AZOBR_RS05905
AZOBR_RS08305
AZOBR_RS08390
AZOBR_RS09155
AZOBR_RS09410
AZOBR_RS13310
AZOBR_RS16265
AZOBR_RS18775
AZOBR_RS21545
AZOBR_RS21600
AZOBR_RS22705
AZOBR_RS24695
AZOBR_RS25420
AZOBR_RS25730
AZOBR_RS25910
AZOBR_RS26450
AZOBR_RS27545
AZOBR_RS27580
AZOBR_RS27660
AZOBR_RS28175
AZOBR_RS29790
AZOBR_RS30020
AZOBR_RS31580
AZOBR_RS32755
3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase:
a (3R)-3-hydroxybutanoyl-[acp]→a (2E)-but-2-enoyl-[acp] + H2O (EC 4.2.1.59)
AZOBR_RS07370
Enoyl-[acyl-carrier-protein] reductase (NADH) (in reverse):
a (2E)-but-2-enoyl-[acp] + NADH + H+→a butanoyl-[acp] + NAD+ (EC 1.3.1.9)
AZOBR_RS08105
AZOBR_RS09570
AZOBR_RS10720
AZOBR_RS18895
Beta-ketoacyl-acyl-carrier-protein synthase II:
a butanoyl-[acp] + a malonyl-[acp] + H+→a 3-oxohexanoyl-[acp] + a soluble [acyl-carrier protein] + CO2 (EC 2.3.1.179; 2.3.1.41)
AZOBR_RS04690
AZOBR_RS04705
AZOBR_RS08400
3-oxoacyl-[acyl-carrier-protein] reductase (in reverse):
a 3-oxohexanoyl-[acp] + NADPH + H+→a (3R)-3-hydroxyhexanoyl-[acp] + NADP+ (EC 1.1.1.100)
AZOBR_RS04635
AZOBR_RS04695
AZOBR_RS05905
AZOBR_RS08305
AZOBR_RS08390
AZOBR_RS09155
AZOBR_RS09410
AZOBR_RS13310
AZOBR_RS16265
AZOBR_RS18775
AZOBR_RS21545
AZOBR_RS21600
AZOBR_RS22705
AZOBR_RS24695
AZOBR_RS25420
AZOBR_RS25730
AZOBR_RS25910
AZOBR_RS26450
AZOBR_RS27545
AZOBR_RS27580
AZOBR_RS27660
AZOBR_RS28175
AZOBR_RS29790
AZOBR_RS30020
AZOBR_RS31580
AZOBR_RS32755
3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase:
a (3R)-3-hydroxyhexanoyl-[acp]→a (2E)-hex-2-enoyl-[acp] + H2O (EC 4.2.1.59)
AZOBR_RS07370
Enoyl-[acyl-carrier-protein] reductase (NADH) (in reverse):
a (2E)-hex-2-enoyl-[acp] + NADH + H+→a hexanoyl-[acp] + NAD+ (EC 1.3.1.9)
AZOBR_RS08105
AZOBR_RS09570
AZOBR_RS10720
AZOBR_RS18895
Beta-ketoacyl-acyl-carrier-protein synthase II:
a hexanoyl-[acp] + a malonyl-[acp] + H+→a 3-oxooctanoyl-[acp] + a soluble [acyl-carrier protein] + CO2 (EC 2.3.1.179; 2.3.1.41)
AZOBR_RS04690
AZOBR_RS04705
AZOBR_RS08400
3-oxoacyl-[acyl-carrier-protein] reductase (in reverse):
a 3-oxooctanoyl-[acp] + NADPH + H+→a (3R)-3-hydroxyoctanoyl-[acp] + NADP+ (EC 1.1.1.100)
AZOBR_RS04635
AZOBR_RS04695
AZOBR_RS05905
AZOBR_RS08305
AZOBR_RS08390
AZOBR_RS09155
AZOBR_RS09410
AZOBR_RS13310
AZOBR_RS16265
AZOBR_RS18775
AZOBR_RS21545
AZOBR_RS21600
AZOBR_RS22705
AZOBR_RS24695
AZOBR_RS25420
AZOBR_RS25730
AZOBR_RS25910
AZOBR_RS26450
AZOBR_RS27545
AZOBR_RS27580
AZOBR_RS27660
AZOBR_RS28175
AZOBR_RS29790
AZOBR_RS30020
AZOBR_RS31580
AZOBR_RS32755
3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase:
a (3R)-3-hydroxyoctanoyl-[acp]→a (2E)-oct-2-enoyl-[acp] + H2O (EC 4.2.1.59)
AZOBR_RS07370
Enoyl-[acyl-carrier-protein] reductase (NADH) (in reverse):
a (2E)-oct-2-enoyl-[acp] + NADH + H+→an octanoyl-[acp] + NAD+ (EC 1.3.1.9)
AZOBR_RS08105
AZOBR_RS09570
AZOBR_RS10720
AZOBR_RS18895
Beta-ketoacyl-acyl-carrier-protein synthase II:
an octanoyl-[acp] + a malonyl-[acp] + H+→a 3-oxodecanoyl-[acp] + a soluble [acyl-carrier protein] + CO2 (EC 2.3.1.179; 2.3.1.41)
AZOBR_RS04690
AZOBR_RS04705
AZOBR_RS08400
3-oxoacyl-[acyl-carrier-protein] reductase (in reverse):
a 3-oxodecanoyl-[acp] + NADPH + H+→a (3R)-3-hydroxydecanoyl-[acp] + NADP+ (EC 1.1.1.100)
AZOBR_RS04635
AZOBR_RS04695
AZOBR_RS05905
AZOBR_RS08305
AZOBR_RS08390
AZOBR_RS09155
AZOBR_RS09410
AZOBR_RS13310
AZOBR_RS16265
AZOBR_RS18775
AZOBR_RS21545
AZOBR_RS21600
AZOBR_RS22705
AZOBR_RS24695
AZOBR_RS25420
AZOBR_RS25730
AZOBR_RS25910
AZOBR_RS26450
AZOBR_RS27545
AZOBR_RS27580
AZOBR_RS27660
AZOBR_RS28175
AZOBR_RS29790
AZOBR_RS30020
AZOBR_RS31580
AZOBR_RS32755
3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase:
a (3R)-3-hydroxydecanoyl-[acp]→a (2E)-dec-2-enoyl-[acp] + H2O (EC 4.2.1.59)
AZOBR_RS07370
Enoyl-[acyl-carrier-protein] reductase (NADH) (in reverse):
a (2E)-dec-2-enoyl-[acp] + NADH + H+→a decanoyl-[acp] + NAD+ (EC 1.3.1.9)
AZOBR_RS08105
AZOBR_RS09570
AZOBR_RS10720
AZOBR_RS18895
Beta-ketoacyl-acyl-carrier-protein synthase II:
a decanoyl-[acp] + a malonyl-[acp] + H+→a 3-oxododecanoyl-[acp] + a soluble [acyl-carrier protein] + CO2 (EC 2.3.1.179; 2.3.1.41)
AZOBR_RS04690
AZOBR_RS04705
AZOBR_RS08400
3-oxoacyl-[acyl-carrier-protein] reductase (in reverse):
a 3-oxododecanoyl-[acp] + NADPH + H+→a (3R)-3-hydroxydodecanoyl-[acp] + NADP+ (EC 1.1.1.100)
AZOBR_RS04635
AZOBR_RS04695
AZOBR_RS05905
AZOBR_RS08305
AZOBR_RS08390
AZOBR_RS09155
AZOBR_RS09410
AZOBR_RS13310
AZOBR_RS16265
AZOBR_RS18775
AZOBR_RS21545
AZOBR_RS21600
AZOBR_RS22705
AZOBR_RS24695
AZOBR_RS25420
AZOBR_RS25730
AZOBR_RS25910
AZOBR_RS26450
AZOBR_RS27545
AZOBR_RS27580
AZOBR_RS27660
AZOBR_RS28175
AZOBR_RS29790
AZOBR_RS30020
AZOBR_RS31580
AZOBR_RS32755
3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase:
a (3R)-3-hydroxydodecanoyl-[acp]→a (2E)-dodec-2-enoyl-[acp] + H2O (EC 4.2.1.59)
AZOBR_RS07370
Enoyl-[acyl-carrier-protein] reductase (NADH) (in reverse):
a (2E)-dodec-2-enoyl-[acp] + NADH + H+→a dodecanoyl-[acp] + NAD+ (EC 1.3.1.9)
AZOBR_RS08105
AZOBR_RS09570
AZOBR_RS10720
AZOBR_RS18895
Dodecanoyl-[acyl-carrier-protein] hydrolase:
a dodecanoyl-[acp][nil] + H2O[nil]→laurate[nil] + a soluble [acyl-carrier protein][nil] + H+[nil] (EC 3.1.2.21)
No genes
Beta-ketoacyl-acyl-carrier-protein synthase II:
a dodecanoyl-[acp] + a malonyl-[acp] + H+→a 3-oxotetradecanoyl-[acp] + a soluble [acyl-carrier protein] + CO2 (EC 2.3.1.179; 2.3.1.41)
AZOBR_RS04690
AZOBR_RS04705
AZOBR_RS08400
Butyrate--CoA ligase:
laurate + ATP + coenzyme A→lauroyl-CoA + AMP + diphosphate (EC 6.2.1.2; 6.2.1.3)
AZOBR_RS22345
AZOBR_RS31155
3-oxoacyl-[acyl-carrier-protein] reductase (in reverse):
a 3-oxotetradecanoyl-[acp] + NADPH + H+→a (3R)-3-hydroxytetradecanoyl-[acp] + NADP+ (EC 1.1.1.100)
AZOBR_RS04635
AZOBR_RS04695
AZOBR_RS05905
AZOBR_RS08305
AZOBR_RS08390
AZOBR_RS09155
AZOBR_RS09410
AZOBR_RS13310
AZOBR_RS16265
AZOBR_RS18775
AZOBR_RS21545
AZOBR_RS21600
AZOBR_RS22705
AZOBR_RS24695
AZOBR_RS25420
AZOBR_RS25730
AZOBR_RS25910
AZOBR_RS26450
AZOBR_RS27545
AZOBR_RS27580
AZOBR_RS27660
AZOBR_RS28175
AZOBR_RS29790
AZOBR_RS30020
AZOBR_RS31580
AZOBR_RS32755
3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase:
a (3R)-3-hydroxytetradecanoyl-[acp]→a (2E)-tetradec-2-enoyl-[acp] + H2O (EC 4.2.1.59)
AZOBR_RS07370
Enoyl-[acyl-carrier-protein] reductase (NADH) (in reverse):
a (2E)-tetradec-2-enoyl-[acp] + NADH + H+→a myristoyl-[acp] + NAD+ (EC 1.3.1.9)
AZOBR_RS08105
AZOBR_RS09570
AZOBR_RS10720
AZOBR_RS18895
Beta-ketoacyl-acyl-carrier-protein synthase II:
a myristoyl-[acp] + a malonyl-[acp] + H+→a 3-oxohexadecanoyl-[acp] + a soluble [acyl-carrier protein] + CO2 (EC 2.3.1.179; 2.3.1.41)
AZOBR_RS04690
AZOBR_RS04705
AZOBR_RS08400
3-oxoacyl-[acyl-carrier-protein] reductase (in reverse):
a 3-oxohexadecanoyl-[acp] + NADPH + H+→a (3R)-3-hydroxyhexadecanoyl-[acp] + NADP+ (EC 1.1.1.100)
AZOBR_RS04635
AZOBR_RS04695
AZOBR_RS05905
AZOBR_RS08305
AZOBR_RS08390
AZOBR_RS09155
AZOBR_RS09410
AZOBR_RS13310
AZOBR_RS16265
AZOBR_RS18775
AZOBR_RS21545
AZOBR_RS21600
AZOBR_RS22705
AZOBR_RS24695
AZOBR_RS25420
AZOBR_RS25730
AZOBR_RS25910
AZOBR_RS26450
AZOBR_RS27545
AZOBR_RS27580
AZOBR_RS27660
AZOBR_RS28175
AZOBR_RS29790
AZOBR_RS30020
AZOBR_RS31580
AZOBR_RS32755
3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase:
a (3R)-3-hydroxyhexadecanoyl-[acp]→a (2E)-hexadec-2-enoyl-[acp] + H2O (EC 4.2.1.59)
AZOBR_RS07370
Enoyl-[acyl-carrier-protein] reductase (NADH) (in reverse):
a (2E)-hexadec-2-enoyl-[acp] + NADH + H+→a palmitoyl-[acp] + NAD+ (EC 1.3.1.9)
AZOBR_RS08105
AZOBR_RS09570
AZOBR_RS10720
AZOBR_RS18895
Oleoyl-[acyl-carrier-protein] hydrolase:
a palmitoyl-[acp] + H2O→palmitate + a soluble [acyl-carrier protein] + H+ (EC 3.1.2.14)
No genes
Beta-ketoacyl-acyl-carrier-protein synthase I:
a palmitoyl-[acp] + a malonyl-[acp] + H+→a 3-oxooctadecanoyl-[acp] + a soluble [acyl-carrier protein] + CO2 (EC 2.3.1.41)
AZOBR_RS04690
AZOBR_RS04705
Long-chain-fatty-acid--CoA ligase:
palmitate + ATP + coenzyme A→palmitoyl-CoA + AMP + diphosphate (EC 6.2.1.3)
AZOBR_RS22345
AZOBR_RS22375
AZOBR_RS26805
AZOBR_RS31155
3-oxoacyl-[acyl-carrier-protein] reductase (in reverse):
a 3-oxooctadecanoyl-[acp] + NADPH + H+→a (3R)-3-hydroxyoctadecanoyl-[acp] + NADP+ (EC 1.1.1.100)
AZOBR_RS04635
AZOBR_RS04695
AZOBR_RS05905
AZOBR_RS08305
AZOBR_RS08390
AZOBR_RS09155
AZOBR_RS09410
AZOBR_RS13310
AZOBR_RS16265
AZOBR_RS18775
AZOBR_RS21545
AZOBR_RS21600
AZOBR_RS22705
AZOBR_RS24695
AZOBR_RS25420
AZOBR_RS25730
AZOBR_RS25910
AZOBR_RS26450
AZOBR_RS27545
AZOBR_RS27580
AZOBR_RS27660
AZOBR_RS28175
AZOBR_RS29790
AZOBR_RS30020
AZOBR_RS31580
AZOBR_RS32755
3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase:
a (3R)-3-hydroxyoctadecanoyl-[acp]→a (2E)-octadec-2-enoyl-[acp] + H2O (EC 4.2.1.59)
AZOBR_RS07370
Enoyl-[acyl-carrier-protein] reductase (NADH) (in reverse):
a (2E)-octadec-2-enoyl-[acp] + NADH + H+→a stearoyl-[acp] + NAD+ (EC 1.3.1.9)
AZOBR_RS08105
AZOBR_RS09570
AZOBR_RS10720
AZOBR_RS18895
Acyl-[acyl-carrier-protein] desaturase:
a stearoyl-[acp] + dioxygen + 2 H+ + 2 a reduced ferredoxin [iron-sulfur] cluster→an oleoyl-[acp] + 2 an oxidized ferredoxin [iron-sulfur] cluster + 2 H2O (EC 1.14.19.2)
No genes
Oleoyl-[acyl-carrier-protein] hydrolase:
a stearoyl-[acp] + H2O→stearate + a soluble [acyl-carrier protein] + H+ (EC 3.1.2.14)
No genes
Oleoyl-[acyl-carrier-protein] hydrolase:
an oleoyl-[acp] + H2O→oleate + a soluble [acyl-carrier protein] + H+ (EC 3.1.2.14)
No genes
Long-chain-fatty-acid--CoA ligase:
stearate + ATP + coenzyme A→stearoyl-CoA + AMP + diphosphate (EC 6.2.1.3)
AZOBR_RS22345
AZOBR_RS31155
Long-chain-fatty-acid--CoA ligase:
oleate + ATP + coenzyme A→oleoyl-CoA + AMP + diphosphate (EC 6.2.1.3)
AZOBR_RS22345
AZOBR_RS31155

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information