MetaCyc Pathway: L-glutamate degradation VII (to butanoate) in Azospirillum brasilense Sp245

Add experiment(s):


Methylaspartate mutase (in reverse):
L-glutamate→(2S, 3S)-3-methylaspartate
(EC 5.4.99.1)
No genes
Methylaspartate ammonia-lyase:
(2S, 3S)-3-methylaspartate→mesaconate + ammonium
(EC 4.3.1.2)
No genes
(S)-2-methylmalate dehydratase (in reverse):
mesaconate + H2O→(S)-citramalate
(EC 4.2.1.34)
No genes
Citramalate lyase:
(S)-citramalate→pyruvate + acetate
(EC 4.1.3.22)
No genes
Pyruvate synthase:
pyruvate + coenzyme A + 2 an oxidized ferredoxin [iron-sulfur] cluster→acetyl-CoA + 2 a reduced ferredoxin [iron-sulfur] cluster + CO2 + H+
(EC 1.2.7.1)
No genes
Acetyl-CoA C-acyltransferase:
2 acetyl-CoA→acetoacetyl-CoA + coenzyme A
(EC 2.3.1.16; 2.3.1.9)
AZOBR_RS20220
AZOBR_RS28180
AZOBR_RS30610
Ferredoxin hydrogenase (in reverse):
2 a reduced ferredoxin [iron-sulfur] cluster + 2 H+→H2 + 2 an oxidized ferredoxin [iron-sulfur] cluster
(EC 1.12.7.2)
AZOBR_RS07200
AZOBR_RS14525
3-hydroxyacyl-CoA dehydrogenase (in reverse):
acetoacetyl-CoA + NADH + H+→(S)-3-hydroxybutanoyl-CoA + NAD+
(EC 1.1.1.35)
AZOBR_RS09555
AZOBR_RS16920
AZOBR_RS20225
AZOBR_RS26110
AZOBR_RS29225
(S)-3-hydroxybutanoyl-CoA→crotonyl-CoA + H2O (EC 4.2.1.150)
AZOBR_RS01260
AZOBR_RS03680
AZOBR_RS07775
AZOBR_RS09775
AZOBR_RS13325
AZOBR_RS15730
AZOBR_RS18155
AZOBR_RS24105
AZOBR_RS24715
AZOBR_RS26270
AZOBR_RS26485
AZOBR_RS26830
AZOBR_RS27635
AZOBR_RS29210
crotonyl-CoA[cytosol] + 2 NADH[cytosol] + 2 an oxidized ferredoxin [iron-sulfur] cluster[cytosol]→2 a reduced ferredoxin [iron-sulfur] cluster[cytosol] + butanoyl-CoA[cytosol] + 2 NAD+[cytosol] (EC 1.3.1.109)
No genes
Phosphate butyryltransferase:
butanoyl-CoA + phosphate→butanoyl phosphate + coenzyme A
(EC 2.3.1.19)
AZOBR_RS04600
Branched-chain-fatty-acid kinase (in reverse):
butanoyl phosphate + ADP→butanoate + ATP
(EC 2.7.2.14; 2.7.2.7)
No genes

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information