MetaCyc Pathway: lycopadiene biosynthesis in Acidovorax sp. GW101-3H11

Add experiment(s):


2 geranylgeranyl diphosphate→prephytoene diphosphate + diphosphate (EC 2.5.1.148; 2.5.1.32)
Ac3H11_927
Ac3H11_931
prephytoene diphosphate + NADPH + H+→lycopaoctaene + NADP+ + diphosphate (EC 2.5.1.148)
No genes
lycopaoctaene + 2 a reduced two electron carrier→(2E6E,10E,14E,18E,22E)-lycopahexaene + 2 an oxidized electron carrier
No genes
(2E6E,10E,14E,18E,22E)-lycopahexaene + a reduced two electron carrier→(2E,6E,10E,14E,18E)-lycopapentaene + an oxidized electron carrier
No genes
(2E,6E,10E,14E,18E)-lycopapentaene + a reduced two electron carrier→(2E,10E,14E,18E)-lycopatetraene + an oxidized electron carrier
No genes
(2E,10E,14E,18E)-lycopatetraene + a reduced two electron carrier→(2E,14E,18E)-lycopatriene + an oxidized electron carrier
No genes
(2E,14E,18E)-lycopatriene + a reduced two electron carrier→(14E,18E)-lycopadiene + an oxidized electron carrier
No genes

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information