MetaCyc Pathway: peptidoglycan recycling I in Xanthomonas campestris pv. campestris strain 8004

Add experiment(s):


a mature peptidoglycan (meso-DAP containing)→a mature peptidoglycan (meso-DAP containing) + GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-meso-DAP-D-Ala (EC 4.2.2.f)
No genes
GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-meso-DAP-D-Ala[out] + H+[out]→GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-meso-DAP-D-Ala[in] + H+[in]
No genes
N-acetylmuramoyl-L-alanine amidase:
GlcNAc-1,6-anhMurNAc-L-Ala-γ-D-Glu-meso-DAP-D-Ala + H2ON-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate + L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine
(EC 3.5.1.28)
Xcc-8004.2255.1
Xcc-8004.3058.1
Xcc-8004.3342.1
Xcc-8004.4814.1
Beta-N-acetylhexosaminidase:
N-acetyl-β-D-glucosamine-1,6-anhydro-N-acetyl-β-D-muramate + H2O→1,6-anhydro-N-acetyl-β-D-muramate + N-acetyl-D-glucosamine
(EC 3.2.1.52)
Xcc-8004.1545.1
Xcc-8004.3663.1
Muramoyltetrapeptide carboxypeptidase:
L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanine + H2O→L-alanyl-γ-D-glutamyl-meso-diaminopimelate + D-alanine
(EC 3.4.17.13)
No genes
1,6-anhydro-N-acetyl-β-D-muramate + ATP + H2ON-acetyl-D-muramate 6-phosphate + ADP + H+ (EC 2.7.1.170)
No genes
N-acetyl-D-muramate 6-phosphate + H2ON-acetyl-D-glucosamine 6-phosphate + (R)-lactate (EC 4.2.1.126)
No genes
N-acetylglucosamine-6-phosphate deacetylase:
N-acetyl-D-glucosamine 6-phosphate + H2O→D-glucosamine 6-phosphate + acetate
(EC 3.5.1.25)
Xcc-8004.957.1
Phosphoglucosamine mutase:
D-glucosamine 6-phosphate→α-D-glucosamine 1-phosphate
(EC 5.4.2.10)
Xcc-8004.1969.1
Glucosamine-1-phosphate N-acetyltransferase:
α-D-glucosamine 1-phosphate + acetyl-CoAN-acetyl-α-D-glucosamine 1-phosphate + coenzyme A + H+
(EC 2.3.1.157)
Xcc-8004.4567.1
UDP-N-acetylglucosamine diphosphorylase:
N-acetyl-α-D-glucosamine 1-phosphate + H+ + UTP→UDP-N-acetyl-α-D-glucosamine + diphosphate
(EC 2.7.7.23)
Xcc-8004.4567.1
UDP-N-acetylglucosamine 1-carboxyvinyltransferase:
UDP-N-acetyl-α-D-glucosamine + phosphoenolpyruvate→UDP-N-acetyl-α-D-glucosamine-enolpyruvate + phosphate
(EC 2.5.1.7)
Xcc-8004.1669.1
UDP-N-acetyl-α-D-glucosamine-enolpyruvate + NADPH + H+→UDP-N-acetyl-α-D-muramate + NADP+ (EC 1.3.1.98)
Xcc-8004.3033.1
L-alanyl-γ-D-glutamyl-meso-diaminopimelate + UDP-N-acetyl-α-D-muramate + ATP→UDP-MurNAc-L-Ala-γ-D-Glu-meso-DAP + ADP + H+ + phosphate (EC 6.3.2.45)
Xcc-8004.1107.1

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information