MetaCyc Pathway: pyrimidine deoxyribonucleotides biosynthesis from CTP in Xanthomonas campestris pv. campestris strain 8004

Nucleoside-triphosphatase: CTP + H2O→CDP + H+ + phosphate (EC 3.6.1.15; 3.6.1.5)

Xcc-8004.1223.1

Ribonucleoside-diphosphate reductase (in reverse): CDP + a reduced thioredoxin→dCDP + an oxidized thioredoxin + H2O (EC 1.17.4.1)

Xcc-8004.5059.1

Xcc-8004.5060.1

Nucleoside-diphosphate kinase: dCDP + ATP→dCTP + ADP (EC 2.7.4.6)

Xcc-8004.2738.1

Apyrase: dCDP + H2O→dCMP + H+ + phosphate (EC 3.6.1.5; 3.6.1.6)

No genes

dCMP deaminase: dCMP + H+ + H2O→dUMP + ammonium (EC 3.5.4.12)

Xcc-8004.169.1

Thymidylate synthase: dUMP + a 5,10-methylenetetrahydrofolate→dTMP + a 7,8-dihydrofolate (EC 2.1.1.45)

Xcc-8004.4277.1

T(2)-induced deoxynucleotide kinase: dTMP + ATP→dTDP + ADP (EC 2.7.4.12; 2.7.4.13; 2.7.4.9)

Xcc-8004.4992.1

Nucleoside-diphosphate kinase: dTDP + ATP→dTTP + ADP (EC 2.7.4.6)

Xcc-8004.2738.1

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information