MetaCyc Pathway: superpathway of polyamine biosynthesis I in Ralstonia solanacearum IBSBF1503

Arginine decarboxylase:
L-arginine + H⁺→agmatine + CO₂ (EC 4.1.1.19)

Arginase:
L-arginine + H₂O→L-ornithine + urea (EC 3.5.3.1)

Lysine decarboxylase:
L-lysine + H⁺→cadaverine + CO₂ (EC 4.1.1.18)

Adenosylmethionine decarboxylase:
S-adenosyl-L-methionine + H⁺→S-adenosyl 3-(methylsulfanyl)propylamine + CO₂ (EC 4.1.1.50)

RALBFv3_RS17635

Agmatinase:
agmatine + H₂O→putrescine + urea (EC 3.5.3.11)

RALBFv3_RS16300

Ornithine decarboxylase:
L-ornithine + H⁺→putrescine + CO₂ (EC 4.1.1.17)

RALBFv3_RS04325

cadaverine + S-adenosyl 3-(methylsulfanyl)propylamine→aminopropylcadaverine + S-methyl-5'-thioadenosine + H⁺

No genes

Spermidine synthase:
putrescine + S-adenosyl 3-(methylsulfanyl)propylamine→spermidine + S-methyl-5'-thioadenosine + H⁺ (EC 2.5.1.16)

RALBFv3_RS14145

RALBFv3_RS17585

RALBFv3_RS19755

Links:

Pathway details at MetaCyc
Fitness data for 8 genes
Select organism:
All MetaCyc pathways for Ralstonia solanacearum IBSBF1503

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information