MetaCyc Pathway: indole-3-acetate biosynthesis VI (bacteria) in Rahnella sp. WP5

Add experiment(s):


Aspartate transaminase:
L-tryptophan + 2-oxoglutarate→(indol-3-yl)pyruvate + L-glutamate
(EC 2.6.1.1; 2.6.1.27)
EX31_RS03060
EX31_RS05810
EX31_RS10390
EX31_RS11565
EX31_RS13555
EX31_RS15520
EX31_RS17445
EX31_RS17525
EX31_RS18145
EX31_RS19445
EX31_RS19635
EX31_RS23055
EX31_RS23680
Indolepyruvate decarboxylase:
(indol-3-yl)pyruvate + H+→(indol-3-yl)acetaldehyde + CO2
(EC 4.1.1.74)
EX31_RS20060
Indole-3-acetaldehyde oxidase:
(indol-3-yl)acetaldehyde + dioxygen + H2O→(indol-3-yl)acetate + hydrogen peroxide + H+
(EC 1.2.3.7)
No genes

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information