MetaCyc Pathway: fatty acid β-oxidation IV (unsaturated, even number) in Rhodopseudomonas palustris CGA009

Add experiment(s):


3-hydroxybutyryl-CoA epimerase:
a 2,3,4-saturated (3R)-3-hydroxyacyl-CoA→a 2,3,4-saturated (3S)-3-hydroxyacyl-CoA
(EC 5.1.2.3)
TX73_004220
TX73_019255
a (2E,4Z)-2,4-dienoyl-CoA + NADPH + H+→a (3E)-3-enoyl-CoA + NADP+ (EC 1.3.1.124)
No genes
a 2,3,4-saturated (3R)-3-hydroxyacyl-CoA→a (2E)-2-enoyl-CoA + H2O (EC 4.2.1.119)
No genes
Dodecenoyl-CoA isomerase:
a (3E)-3-enoyl-CoA→a (2E)-2-enoyl-CoA
(EC 5.3.3.8)
TX73_019255
Enoyl-CoA hydratase (in reverse):
a (2E)-2-enoyl-CoA + H2O→a 2,3,4-saturated (3S)-3-hydroxyacyl-CoA
(EC 4.2.1.17)
TX73_001990
TX73_002165
TX73_002395
TX73_002500
TX73_002510
TX73_003370
TX73_003500
TX73_004220
TX73_004930
TX73_006355
TX73_007240
TX73_008780
TX73_008810
TX73_009040
TX73_009055
TX73_009075
TX73_009185
TX73_009315
TX73_011065
TX73_011975
TX73_014325
TX73_017085
TX73_017810
TX73_017840
TX73_017875
TX73_019255
TX73_019650
TX73_022390
TX73_022490

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information