MetaCyc Pathway: L-isoleucine biosynthesis I (from threonine) in Rhodopseudomonas palustris CGA009

Add experiment(s):


Threonine ammonia-lyase:
L-threonine→(Z)-2-aminobutenoate + H2O
(EC 4.3.1.19)
TX73_020550
1-aminocyclopropane-1-carboxylate deaminase:
(Z)-2-aminobutenoate→2-iminobutanoate
(spontaneous) (EC 3.5.99.7; 4.3.1.19; 4.4.1.1; 4.4.1.11; 4.4.1.2)
TX73_001930
TX73_012185
TX73_020550
2-iminobutanoate + H2O→2-oxobutanoate + ammonium (spontaneous) (EC 3.5.99.10; 3.5.99.7; 4.3.1.19; 4.4.1.1; 4.4.1.11; 4.4.1.2)
TX73_001930
TX73_012185
TX73_020550
Acetolactate synthase:
2-oxobutanoate + H+ + pyruvate→(S)-2-aceto-2-hydroxybutanoate + CO2
(EC 2.2.1.6)
TX73_000555
TX73_008310
TX73_010315
TX73_010465
TX73_010470
TX73_012030
TX73_014300
TX73_019485
TX73_020305
TX73_021005
Ketol-acid reductoisomerase (in reverse):
(S)-2-aceto-2-hydroxybutanoate + NADPH + H+→(R)-2,3-dihydroxy-3-methylpentanoate + NADP+
(EC 1.1.1.86)
TX73_010485
Dihydroxy-acid dehydratase:
(R)-2,3-dihydroxy-3-methylpentanoate→(3S)-3-methyl-2-oxopentanoate + H2O
(EC 4.2.1.9)
TX73_007515
TX73_011115
TX73_012105
TX73_017970
Branched-chain-amino-acid transaminase (in reverse):
(3S)-3-methyl-2-oxopentanoate + L-glutamate→L-isoleucine + 2-oxoglutarate
(EC 2.6.1.42)
TX73_022650
TX73_023855

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information