MetaCyc Pathway: L-asparagine biosynthesis III (tRNA-dependent) in Phaeobacter inhibens DSM 17395

Add experiment(s):


Glutamate synthase (NADPH):
L-glutamine + H2O→ammonia + L-glutamate + H+ (EC 1.4.1.13; 1.4.1.14; 1.4.7.1; 2.6.1.85; 3.5.1.2; 3.5.1.38; 4.1.3.27; 4.3.2.10; 4.3.3.6; 6.3.4.2; 6.3.5.13; 6.3.5.2; 6.3.5.4; 6.3.5.5; 6.3.5.6; 6.3.5.7)
PGA1_c10640
PGA1_c11530
PGA1_c11920
PGA1_c12810
PGA1_c01480
PGA1_c14610
PGA1_c14650
PGA1_c16860
PGA1_c16880
PGA1_c20950
PGA1_c21020
PGA1_c21970
PGA1_c21980
PGA1_c23810
PGA1_c23900
PGA1_c24550
PGA1_c24560
PGA1_c24810
PGA1_c25220
PGA1_c25290
PGA1_c25470
PGA1_c28350
PGA1_c02920
PGA1_c29510
PGA1_c32410
PGA1_c32590
PGA1_c33270
PGA1_c35950
PGA1_c36090
PGA1_c36100
PGA1_c06520
PGA1_c06670
PGA1_c09550
PGA1_c09840
Aspartate--tRNA(Asn) ligase:
L-aspartate + tRNAAsn + ATP→an L-aspartyl-[tRNAAsn] + AMP + diphosphate (EC 6.1.1.23)
PGA1_c24530
Asparaginyl-tRNA synthase (glutamine-hydrolyzing):
an L-aspartyl-[tRNAAsn] + ATP→a 4-phosphooxy-L-aspartyl-[tRNAAsn] + ADP (EC 6.3.5.6)
PGA1_c21970
PGA1_c21980
PGA1_c25470
PGA1_c33270
PGA1_c09840
Asparaginyl-tRNA synthase (glutamine-hydrolyzing):
a 4-phosphooxy-L-aspartyl-[tRNAAsn] + ammonia→an L-asparaginyl-[tRNAAsn] + phosphate (EC 6.3.5.6)
PGA1_c21970
PGA1_c21980
PGA1_c25470
PGA1_c33270
PGA1_c09840

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information