MetaCyc Pathway: limonene degradation IV (anaerobic) in Phaeobacter inhibens DSM 17395

Add experiment(s):


limonene + an oxidized electron carrier + H2O→perillyl alcohol + a reduced two electron carrier (EC 1.17.99.8)
No genes
Perillyl-alcohol dehydrogenase:
perillyl alcohol + NAD+→perillyl aldehyde + NADH + H+ (EC 1.1.1.144)
No genes
Aldehyde dehydrogenase (NAD(+)):
perillyl aldehyde + NAD+ + H2O→perillate + NADH + 2 H+ (EC 1.2.1.3)
PGA1_c21070
PGA1_c23350
PGA1_c26830
PGA1_c27190
PGA1_c32120
PGA1_c32250
PGA1_c32800
PGA1_c33040
PGA1_262p00230
PGA1_262p00800
PGA1_262p01380
PGA1_262p01460
PGA1_262p01790
PGA1_78p00120
PGA1_c05130
perillate + ATP + coenzyme A→perillyl-CoA + AMP + diphosphate (EC 6.2.1.M31)
No genes
perillyl-CoA + H2O→2-hydroxy-4-isopropenylcyclohexane-1-carboxyl-CoA
No genes
2-hydroxy-4-isopropenylcyclohexane-1-carboxyl-CoA + NAD+→2-oxo-4-Isopropenylcyclohexane-1-carboxyl-CoA + NADH + H+
No genes
2-oxo-4-Isopropenylcyclohexane-1-carboxyl-CoA + H2O→4-(isopropenyl)pimeloyl-CoA + H+
No genes

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information