MetaCyc Pathway: pyrimidine deoxyribonucleotides biosynthesis from CTP in Phaeobacter inhibens DSM 17395

Add experiment(s):


Nucleoside-triphosphatase:
CTP + H2O→CDP + H+ + phosphate (EC 3.6.1.15; 3.6.1.5)
PGA1_c35040
Ribonucleoside-diphosphate reductase (in reverse):
CDP + a reduced thioredoxin→dCDP + an oxidized thioredoxin + H2O (EC 1.17.4.1)
PGA1_c16760
PGA1_c06940
Nucleoside-diphosphate kinase:
dCDP + ATP→dCTP + ADP (EC 2.7.4.6)
PGA1_c19750
Apyrase:
dCDP + H2O→dCMP + H+ + phosphate (EC 3.6.1.5; 3.6.1.6)
No genes
dCMP deaminase:
dCMP + H+ + H2O→dUMP + ammonium (EC 3.5.4.12)
No genes
Thymidylate synthase:
dUMP + a 5,10-methylenetetrahydrofolate→dTMP + a 7,8-dihydrofolate (EC 2.1.1.45)
PGA1_c21180
T(2)-induced deoxynucleotide kinase:
dTMP + ATP→dTDP + ADP (EC 2.7.4.12; 2.7.4.13; 2.7.4.9)
PGA1_c08010
Nucleoside-diphosphate kinase:
dTDP + ATP→dTTP + ADP (EC 2.7.4.6)
PGA1_c19750

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information