MetaCyc Pathway: aerobic respiration I (cytochrome c) in Phaeobacter inhibens DSM 17395

Add experiment(s):


NADH[in] + 5 H+[in] + a ubiquinone→a ubiquinol + NAD+[in] + 4 H+[out] (EC 7.1.1.2)
PGA1_c10370
PGA1_c10380
PGA1_c10400
PGA1_c10410
PGA1_c10430
PGA1_c10460
PGA1_c10480
PGA1_c10490
PGA1_c10510
PGA1_c10520
PGA1_c10530
PGA1_c10540
PGA1_c10550
Succinate dehydrogenase (ubiquinone):
succinate[in] + a ubiquinone→a ubiquinol + fumarate[in]
(EC 1.3.5.1)
PGA1_c03760
PGA1_c03780
a ubiquinol + 2 an oxidized c-type cytochrome[out] + 2 H+[in]→2 a reduced c-type cytochrome[out] + 4 H+[out] + a ubiquinone (EC 7.1.1.8)
No genes
4 a reduced c-type cytochrome[out] + dioxygen[in] + 8 H+[in]→2 H2O[in] + 4 an oxidized c-type cytochrome[out] + 4 H+[out] (EC 7.1.1.9)
PGA1_c30090
PGA1_c30100
PGA1_c30110
PGA1_c30120
PGA1_c06250
PGA1_c06260
PGA1_c06290
PGA1_c06710

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information