| a 2,3,4-saturated fatty acid + ATP + coenzyme A→a 2,3,4-saturated fatty acyl CoA + AMP + diphosphate |
| No genes |
Dodecenoyl-CoA isomerase:
a (3Z)-3-enoyl-CoA→a (2E)-2-enoyl-CoA (EC 5.3.3.8) |
| PGA1_c22740 |
| PGA1_c04110 |
3-hydroxybutyryl-CoA epimerase:
a 2,3,4-saturated (3R)-3-hydroxyacyl-CoA→a 2,3,4-saturated (3S)-3-hydroxyacyl-CoA (EC 5.1.2.3) |
| PGA1_c12020 |
| PGA1_c22740 |
| PGA1_c04110 |
| a 2,3,4-saturated fatty acyl CoA + an oxidized electron-transfer flavoprotein + H+→a (2E)-2-enoyl-CoA + a reduced electron-transfer flavoprotein |
| No genes |
Enoyl-CoA hydratase (in reverse):
a (2E)-2-enoyl-CoA + H2O→a 2,3,4-saturated (3S)-3-hydroxyacyl-CoA (EC 4.2.1.17) |
| PGA1_c12020 |
| PGA1_c14440 |
| PGA1_c15660 |
| PGA1_c16990 |
| PGA1_c17350 |
| PGA1_c22740 |
| PGA1_c23460 |
| PGA1_c23920 |
| PGA1_c26820 |
| PGA1_c33450 |
| PGA1_c34200 |
| PGA1_c36500 |
| PGA1_262p01540 |
| PGA1_262p01850 |
| PGA1_262p01980 |
| PGA1_c04110 |
3-hydroxyacyl-CoA dehydrogenase:
a 2,3,4-saturated (3S)-3-hydroxyacyl-CoA + NAD+→a 2,3,4-saturated 3-oxoacyl-CoA + NADH + H+ (EC 1.1.1.35) |
| PGA1_c11320 |
| PGA1_c12020 |
| PGA1_c22740 |
| PGA1_c04110 |
| PGA1_c08420 |
Acetyl-CoA C-acyltransferase (in reverse):
a 2,3,4-saturated 3-oxoacyl-CoA + coenzyme A→a 2,3,4-saturated fatty acyl CoA + acetyl-CoA (EC 2.3.1.16) |
| PGA1_c12030 |
| PGA1_c22730 |
| PGA1_c33180 |
| PGA1_c03400 |
| PGA1_c34350 |
| PGA1_c04090 |
| PGA1_c04120 |
Links:
Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information