MetaCyc Pathway: superpathway of tetrahydrofolate biosynthesis and salvage in Pedobacter sp. GW460-11-11-14-LB5

Add experiment(s):


GTP cyclohydrolase I:
GTP + H2O→7,8-dihydroneopterin 3'-triphosphate + formate + H+
(EC 3.5.4.16)
CA265_RS21890
Methenyltetrahydrofolate cyclohydrolase:
a 5,10-methenyltetrahydrofolate + H2O→an N10-formyltetrahydrofolate + H+
(EC 3.5.4.9)
CA265_RS08950
Aminodeoxychorismate synthase:
chorismate + L-glutamine→4-amino-4-deoxychorismate + L-glutamate
(EC 2.6.1.85)
CA265_RS14515
CA265_RS22895
Aminodeoxychorismate lyase:
4-amino-4-deoxychorismate→4-aminobenzoate + H+ + pyruvate
(EC 4.1.3.38)
CA265_RS14410
Phosphoribosylglycinamide formyltransferase:
an N10-formyltetrahydrofolate + N1-(5-phospho-β-D-ribosyl)glycinamide→a tetrahydrofolate + N2-formyl-N1-(5-phospho-β-D-ribosyl)glycinamide + H+
(EC 2.1.2.2)
CA265_RS02710
7,8-dihydroneopterin 3'-triphosphate + H2O→7,8-dihydroneopterin 3'-phosphate + diphosphate + H+ (EC 3.6.1.67)
No genes
7,8-dihydroneopterin 3'-phosphate + H2O→D-erythro-7,8-dihydroneopterin + phosphate
No genes
Dihydroneopterin aldolase:
D-erythro-7,8-dihydroneopterin→6-(hydroxymethyl)-7,8-dihydropterin + glycolaldehyde
(EC 4.1.2.25)
CA265_RS09625
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase:
6-(hydroxymethyl)-7,8-dihydropterin + ATP→(7,8-dihydropterin-6-yl)methyl diphosphate + AMP + H+
(EC 2.7.6.3)
CA265_RS04420
Dihydropteroate synthase:
(7,8-dihydropterin-6-yl)methyl diphosphate + 4-aminobenzoate→7,8-dihydropteroate + diphosphate
(EC 2.5.1.15)
CA265_RS25285
Dihydrofolate synthase:
7,8-dihydropteroate + ATP + L-glutamate→7,8-dihydrofolate monoglutamate + ADP + H+ + phosphate
(EC 6.3.2.12)
CA265_RS14755
Dihydrofolate reductase (in reverse):
a 7,8-dihydrofolate + NADPH + H+→a tetrahydrofolate + NADP+
(EC 1.5.1.3)
CA265_RS11410
CA265_RS13100
CA265_RS13610
CA265_RS17325

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information