MetaCyc Pathway: pseudouridine degradation in Shewanella loihica PV-4

Add experiment(s):


Pseudouridine kinase:
pseudouridine + ATP→pseudouridine 5'-phosphate + ADP + H+ (EC 2.7.1.83)
Shew_2725
Pseudouridylate synthase (in reverse):
pseudouridine 5'-phosphate + H2O→uracil + D-ribofuranose 5-phosphate (EC 4.2.1.70)
Shew_0099
Shew_0783
Shew_0814
Shew_0916
Shew_1562
Shew_1594
Shew_2246
Shew_2306
Shew_2529
Shew_2547
Shew_2643
Shew_2724
Shew_2825
Shew_2950
Shew_2975

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information