MetaCyc Pathway: lactate racemase nickel cofactor biosynthesis in Desulfovibrio vulgaris Miyazaki F

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nicotinate adenine dinucleotide + hydrogen carbonate→pyridin-1-ium-3,5-dicarboxylate mononucleotide + AMP + 2 H+ (EC 2.5.1.143)
DvMF_0527
pyridin-1-ium-3,5-dicarboxylate mononucleotide + ATP + H+→5-carboxy-1-(5-O-phospho-β-D-ribofuranosyl)pyridin-1-ium-3-carbonyl adenylate + diphosphate (EC 4.4.1.37)
No genes
5-carboxy-1-(5-O-phospho-β-D-ribofuranosyl)pyridin-1-ium-3-carbonyl adenylate + a [LarE]-L-cysteine→a [LarE]-S-[5-carboxy-1-(5-O-phosphono-β-D-ribofuranosyl)pyridin-1-ium-3-carbonyl]-L-cysteine + AMP + H+ (EC 4.4.1.37)
No genes
a [LarE]-S-[5-carboxy-1-(5-O-phosphono-β-D-ribofuranosyl)pyridin-1-ium-3-carbonyl]-L-cysteine→pyridin-1-ium-3-carboxylate-5-thiocarboxylate mononucleotide + a [LarE]-dehydroalanine (EC 4.4.1.37)
No genes
pyridin-1-ium-3-carboxylate-5-thiocarboxylate mononucleotide + ATP + H+→1-(5-O-phospho-β-D-ribofuranosyl)-5-(sulfanylcarbonyl)pyridin-1-ium-3-carbonyl adenylate + diphosphate (EC 4.4.1.37)
No genes
1-(5-O-phospho-β-D-ribofuranosyl)-5-(sulfanylcarbonyl)pyridin-1-ium-3-carbonyl adenylate + a [LarE]-L-cysteine→a [LarE]-S-[1-(5-O-phosphono-β-D-ribofuranosyl)-5-(sulfanylcarbonyl)pyridin-1-ium-3-carbonyl]-L-cysteine + AMP + H+ (EC 4.4.1.37)
No genes
a [LarE]-S-[1-(5-O-phosphono-β-D-ribofuranosyl)-5-(sulfanylcarbonyl)pyridin-1-ium-3-carbonyl]-L-cysteine→pyridin-1-ium-3,5-bisthiocarboxylate mononucleotide + a [LarE]-dehydroalanine (EC 4.4.1.37)
No genes
pyridin-1-ium-3,5-bisthiocarboxylate mononucleotide + Ni2+→pyridin-1-ium-3-thioamide-5-thiocarboxylate mononucleotide Ni pincer complex + 2 H+ (EC 4.99.1.12)
No genes

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information