MetaCyc Pathway: ammonia assimilation cycle III in Desulfovibrio vulgaris Miyazaki F

MetaCyc Pathway: ammonia assimilation cycle III in Desulfovibrio vulgaris Miyazaki F

Glutamate synthase (NADPH):
L-glutamine + H₂O→ammonia + L-glutamate + H⁺ (EC 1.4.1.13; 1.4.1.14; 1.4.7.1; 2.6.1.85; 3.5.1.2; 3.5.1.38; 4.1.3.27; 4.3.2.10; 4.3.3.6; 6.3.4.2; 6.3.5.13; 6.3.5.2; 6.3.5.4; 6.3.5.5; 6.3.5.6; 6.3.5.7)

DvMF_0433 (pyrG)

DvMF_0578 (gatB)

DvMF_2305 (hisH)

DvMF_2838 (gatA)

DvMF_3125 (guaA)

Glutamate synthase (NADPH) (in reverse):
ammonia + 2-oxoglutarate + NADPH + 2 H⁺→L-glutamate + NADP⁺ + H₂O (EC 1.4.1.13; 1.4.1.14)

Glutamate--ammonia ligase:
L-glutamate + ammonium + ATP→L-glutamine + ADP + H⁺ + phosphate (EC 6.3.1.2)

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information