MetaCyc Pathway: L-tyrosine biosynthesis I in Shewanella oneidensis MR-1
| Chorismate mutase: chorismate→prephenate (EC 5.4.99.5) |
| SO1362 (tyrA) |
| SO1367 (pheA) |
| Prephenate dehydrogenase: prephenate + NAD+→3-(4-hydroxyphenyl)pyruvate + CO2 + NADH (EC 1.3.1.12) |
| SO1362 (tyrA) |
| Aspartate transaminase (in reverse): 3-(4-hydroxyphenyl)pyruvate + L-glutamate→L-tyrosine + 2-oxoglutarate (EC 2.6.1.1; 2.6.1.27; 2.6.1.5; 2.6.1.57) |
| SO2072 (hisC) |
| SO2350 (aspC-1) |
| SO2406 (aspC-2) |
| SO2483 |
Links:
- Pathway details at MetaCyc
- Fitness data for 6 genes
- All MetaCyc pathways for Shewanella oneidensis MR-1
Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information