MetaCyc Pathway: adenosine nucleotides degradation II in Shewanella oneidensis MR-1
| 5'-nucleotidase: AMP + H2O→adenosine + phosphate (EC 3.1.3.5) |
| SO0372 |
| SO2001 (ushA) |
| SO2484 |
| SO3317 |
| SO3435 (surE) |
| Adenosine deaminase: adenosine + H+ + H2O→inosine + ammonium (EC 3.5.4.4) |
| SO4731 (add) |
| Purine-nucleoside phosphorylase: inosine + phosphate→hypoxanthine + α-D-ribose-1-phosphate (EC 2.4.2.1) |
| SO0092 (deoD-1) |
| SO1221 (deoD-2) |
| SO2719 (deoD-3) |
| SO4297 |
| SO4467 |
| Xanthine dehydrogenase: hypoxanthine + NAD+ + H2O→xanthine + NADH + H+ (EC 1.17.1.4) |
| No genes |
| Xanthine dehydrogenase: xanthine + NAD+ + H2O→urate + NADH + H+ (EC 1.17.1.4) |
| No genes |
Links:
- Pathway details at MetaCyc
- Fitness data for 11 genes
- All MetaCyc pathways for Shewanella oneidensis MR-1
Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information