MetaCyc Pathway: anaerobic energy metabolism (invertebrates, cytosol) in Shewanella oneidensis MR-1

Add experiment(s):


Phosphoenolpyruvate carboxykinase (GTP) (in reverse):
phosphoenolpyruvate + CO2 + GDP→oxaloacetate + GTP
(EC 4.1.1.32)
No genes
Pyruvate kinase (in reverse):
phosphoenolpyruvate + ADP + H+→pyruvate + ATP
(EC 2.7.1.40)
SO2491 (pykA)
Phosphoenolpyruvate carboxykinase (GTP) (in reverse):
phosphoenolpyruvate + CO2 + IDP→oxaloacetate + ITP
(EC 4.1.1.32)
No genes
Alanine transaminase (in reverse):
pyruvate + L-glutamate→2-oxoglutarate + L-alanine
(EC 2.6.1.2)
SO2483
Malate dehydrogenase (in reverse):
oxaloacetate + NADH + H+→(S)-malate + NAD+
(EC 1.1.1.37; 1.1.1.38)
SO0770 (mdh)
SO3855 (sfcA)
Alanine racemase:
L-alanine→D-alanine
(EC 5.1.1.1; 5.1.1.10)
SO3916 (alr)
Aspartate transaminase:
2-oxoglutarate + L-aspartate→L-glutamate + oxaloacetate
(EC 2.6.1.1)
SO2350 (aspC-1)
SO2406 (aspC-2)
SO2483
SO4343

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information