MetaCyc Pathway: pyruvate fermentation to acetate V in Shewanella oneidensis MR-1
| pyruvate + coenzyme A + NAD+→acetyl-CoA + CO2 + NADH (EC 1.2.1.104) |
| SO0424 (aceE) |
| SO0425 (aceF) |
| SO0426 (lpdA) |
| acetyl-CoA + succinate→acetate + succinyl-CoA (EC 2.8.3.18) |
| No genes |
| Succinate--CoA ligase (ADP-forming) (in reverse): succinyl-CoA + ADP + phosphate→succinate + ATP + coenzyme A (EC 6.2.1.5) |
| SO1932 (sucC) |
| SO1933 (sucD) |
Links:
- Pathway details at MetaCyc
- Fitness data for 5 genes
- All MetaCyc pathways for Shewanella oneidensis MR-1
Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information