MetaCyc Pathway: superpathway of guanosine nucleotides de novo biosynthesis I in Klebsiella michiganensis M5al

Add experiment(s):


IMP dehydrogenase:
IMP + NAD+ + H2O→XMP + NADH + H+
(EC 1.1.1.205)
BWI76_RS21030
GMP synthase (glutamine-hydrolyzing):
XMP + ATP + L-glutamine + H2O→GMP + AMP + L-glutamate + diphosphate + 2 H+
(EC 6.3.5.2)
BWI76_RS14000
BWI76_RS21025
Guanylate kinase:
GMP + ATP→GDP + ADP
(EC 2.7.4.8)
BWI76_RS02190
BWI76_RS27420
Nucleoside-diphosphate kinase:
GDP + ATP→GTP + ADP
(EC 2.7.4.6)
BWI76_RS06840
BWI76_RS21100
Ribonucleoside-diphosphate reductase (in reverse):
GDP + a reduced thioredoxin→dGDP + an oxidized thioredoxin + H2O
(EC 1.17.4.1)
BWI76_RS19940
BWI76_RS19945
BWI76_RS22050
BWI76_RS22055
BWI76_RS22060
Nucleoside-diphosphate kinase:
dGDP + ATP→dGTP + ADP
(EC 2.7.4.6)
BWI76_RS06840
BWI76_RS21100

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information