MetaCyc Pathway: (5Z)-dodecenoate biosynthesis I in Sphingomonas koreensis DSMZ 15582

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3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase:
a (3R)-3-hydroxydecanoyl-[acp]→a (2E)-dec-2-enoyl-[acp] + H2O (EC 4.2.1.59)
Ga0059261_0178
Trans-2-decenoyl-[acyl-carrier-protein] isomerase:
a (2E)-dec-2-enoyl-[acp]→a (3Z)-dec-3-enoyl-[acp] (EC 5.3.3.14)
No genes
Beta-ketoacyl-acyl-carrier-protein synthase II:
a (3Z)-dec-3-enoyl-[acp] + a malonyl-[acp] + H+→a (5Z)-3-oxododec-5-enoyl-[acp] + a soluble [acyl-carrier protein] + CO2 (EC 2.3.1.179; 2.3.1.41)
Ga0059261_0362
3-oxoacyl-[acyl-carrier-protein] reductase (in reverse):
a (5Z)-3-oxododec-5-enoyl-[acp] + NADPH + H+→a (3R,5Z)-3-hydroxydodec-5-enoyl-[acp] + NADP+ (EC 1.1.1.100)
Ga0059261_0364
Ga0059261_0812
Ga0059261_0843
Ga0059261_0844
Ga0059261_0867
Ga0059261_1325
Ga0059261_1787
Ga0059261_1900
Ga0059261_1968
Ga0059261_2637
Ga0059261_2655
Ga0059261_2665
Ga0059261_2801
Ga0059261_2802
Ga0059261_2830
Ga0059261_2841
Ga0059261_2843
Ga0059261_2846
Ga0059261_2853
Ga0059261_2871
Ga0059261_2872
Ga0059261_2882
Ga0059261_2906
Ga0059261_4067
3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase:
a (3R,5Z)-3-hydroxydodec-5-enoyl-[acp]→a (2E,5Z)-dodeca-3,5-dienoyl-[acp] + H2O (EC 4.2.1.59)
Ga0059261_0178
Enoyl-[acyl-carrier-protein] reductase (NADH) (in reverse):
a (2E,5Z)-dodeca-3,5-dienoyl-[acp] + NADH + H+→a (5Z)-dodec-5-enoyl-[acp] + NAD+ (EC 1.3.1.9)
Ga0059261_2468
Ga0059261_2760

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information