MetaCyc Pathway: 8-amino-7-oxononanoate biosynthesis I in Sphingomonas koreensis DSMZ 15582

Add experiment(s):


a malonyl-[acp] + S-adenosyl-L-methionine→a malonyl-[acp] methyl ester + S-adenosyl-L-homocysteine (EC 2.1.1.197)
No genes
Beta-ketoacyl-acyl-carrier-protein synthase II:
a malonyl-[acp] + a malonyl-[acp] methyl ester + H+→a 3-oxoglutaryl-[acp] methyl ester + a soluble [acyl-carrier protein] + CO2 (EC 2.3.1.179; 2.3.1.41)
Ga0059261_0362
3-oxoacyl-[acyl-carrier-protein] reductase (in reverse):
a 3-oxoglutaryl-[acp] methyl ester + NADPH + H+→a (3R)-3-hydroxyglutaryl-[acp] methyl ester + NADP+ (EC 1.1.1.100)
Ga0059261_0364
Ga0059261_0812
Ga0059261_0843
Ga0059261_0844
Ga0059261_0867
Ga0059261_1325
Ga0059261_1787
Ga0059261_1900
Ga0059261_1968
Ga0059261_2637
Ga0059261_2655
Ga0059261_2665
Ga0059261_2801
Ga0059261_2802
Ga0059261_2830
Ga0059261_2841
Ga0059261_2843
Ga0059261_2846
Ga0059261_2853
Ga0059261_2871
Ga0059261_2872
Ga0059261_2882
Ga0059261_2906
Ga0059261_4067
3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase:
a (3R)-3-hydroxyglutaryl-[acp] methyl ester→a (2E)-enoylglutaryl-[acp] methyl ester + H2O (EC 4.2.1.59)
Ga0059261_0178
Enoyl-[acyl-carrier-protein] reductase (NADH) (in reverse):
a (2E)-enoylglutaryl-[acp] methyl ester + NADH + H+→a glutaryl-[acp] methyl ester + NAD+ (EC 1.3.1.9)
Ga0059261_2468
Ga0059261_2760
Beta-ketoacyl-acyl-carrier-protein synthase II:
a glutaryl-[acp] methyl ester + a malonyl-[acp] + H+→a 3-oxopimeloyl-[acp] methyl ester + a soluble [acyl-carrier protein] + CO2 (EC 2.3.1.179; 2.3.1.41)
Ga0059261_0362
3-oxoacyl-[acyl-carrier-protein] reductase (in reverse):
a 3-oxopimeloyl-[acp] methyl ester + NADPH + H+→a (3R)-3-hydroxypimeloyl-[acp] methyl ester + NADP+ (EC 1.1.1.100)
Ga0059261_0364
Ga0059261_0812
Ga0059261_0843
Ga0059261_0844
Ga0059261_0867
Ga0059261_1325
Ga0059261_1787
Ga0059261_1900
Ga0059261_1968
Ga0059261_2637
Ga0059261_2655
Ga0059261_2665
Ga0059261_2801
Ga0059261_2802
Ga0059261_2830
Ga0059261_2841
Ga0059261_2843
Ga0059261_2846
Ga0059261_2853
Ga0059261_2871
Ga0059261_2872
Ga0059261_2882
Ga0059261_2906
Ga0059261_4067
3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase:
a (3R)-3-hydroxypimeloyl-[acp] methyl ester→a (2E)-enoylpimeloyl-[acp] methyl ester + H2O (EC 4.2.1.59)
Ga0059261_0178
Enoyl-[acyl-carrier-protein] reductase (NADH) (in reverse):
a (2E)-enoylpimeloyl-[acp] methyl ester + NADH + H+→a pimeloyl-[acp] methyl ester + NAD+ (EC 1.3.1.9)
Ga0059261_2468
Ga0059261_2760
a pimeloyl-[acp] methyl ester + H2O→a pimeloyl-[acp] + methanol + H+ (EC 3.1.1.85)
No genes
8-amino-7-oxononanoate synthase:
a pimeloyl-[acp] + L-alanine + H+→(8S)-8-amino-7-oxononanoate + a soluble [acyl-carrier protein] + CO2 (EC 2.3.1.47)
Ga0059261_3508
Ga0059261_3672

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information