MetaCyc Pathway: gallate degradation III (anaerobic) in Sphingomonas koreensis DSMZ 15582

Add experiment(s):


Gallate decarboxylase:
gallate + H+→pyrogallol + CO2 (EC 4.1.1.59)
No genes
Pyrogallol hydroxytransferase:
pyrogallol + 1,2,3,5-tetrahydroxybenzene→phloroglucinol + 1,2,3,5-tetrahydroxybenzene (EC 1.97.1.2)
No genes
Phloroglucinol reductase (in reverse):
phloroglucinol + NADPH + H+→dihydrophloroglucinol + NADP+ (EC 1.3.1.57)
No genes
dihydrophloroglucinol + H2O→3-hydroxy-5-oxohexanoate + H+
No genes
Acetate CoA-transferase (in reverse):
3-hydroxy-5-oxohexanoate + acetyl-CoA→acetate + 3-hydroxy-5-oxohexanoyl-CoA (EC 2.8.3.8)
No genes
3-hydroxy-5-oxohexanoyl-CoA + coenzyme A→acetyl-CoA + (S)-3-hydroxybutanoyl-CoA
No genes
(S)-3-hydroxybutanoyl-CoA→crotonyl-CoA + H2O (EC 4.2.1.150)
Ga0059261_0515
Ga0059261_0837
Ga0059261_2159
Ga0059261_2668
Ga0059261_2803
Ga0059261_2815
Ga0059261_2818
Ga0059261_2827
Ga0059261_2840
Ga0059261_2847
Ga0059261_2858
Ga0059261_2861
Ga0059261_2887
Ga0059261_2902
Ga0059261_2908
Ga0059261_3685
Ga0059261_3986
Ga0059261_4214
Ga0059261_4222
crotonyl-CoA[cytosol] + 2 NADH[cytosol] + 2 an oxidized ferredoxin [iron-sulfur] cluster[cytosol]→butanoyl-CoA[cytosol] + 2 NAD+[cytosol] + 2 a reduced ferredoxin [iron-sulfur] cluster[cytosol] (EC 1.3.1.109)
No genes
Propionate CoA-transferase:
acetate + butanoyl-CoA→acetyl-CoA + butanoate (EC 2.8.3.1; 2.8.3.8)
No genes
Phosphate acetyltransferase:
acetyl-CoA + phosphate→acetyl phosphate + coenzyme A (EC 2.3.1.8)
Ga0059261_2552
Acetate kinase (in reverse):
acetyl phosphate + ADP→acetate + ATP (EC 2.7.2.1; 2.7.2.15)
Ga0059261_2551

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information