MetaCyc Pathway: L-tyrosine degradation I in Herbaspirillum seropedicae SmR1

Add experiment(s):


Aspartate transaminase:
L-tyrosine + 2-oxoglutarate→3-(4-hydroxyphenyl)pyruvate + L-glutamate
(EC 2.6.1.1; 2.6.1.27; 2.6.1.5; 2.6.1.57)
HSERO_RS05425
HSERO_RS08395
HSERO_RS08705
HSERO_RS09025
HSERO_RS10455
HSERO_RS12210
HSERO_RS14160
HSERO_RS15115
HSERO_RS15220
HSERO_RS15835
HSERO_RS17885
HSERO_RS20335
HSERO_RS22025
HSERO_RS23235
HSERO_RS23520
4-hydroxyphenylpyruvate dioxygenase:
3-(4-hydroxyphenyl)pyruvate + dioxygen→homogentisate + CO2
(EC 1.13.11.27)
HSERO_RS08335
HSERO_RS18790
HSERO_RS18800
Homogentisate 1,2-dioxygenase:
homogentisate + dioxygen→4-maleyl-acetoacetate + H+
(EC 1.13.11.5)
HSERO_RS05605
Maleylacetoacetate isomerase:
4-maleyl-acetoacetate→4-fumaryl-acetoacetate
(EC 5.2.1.2)
HSERO_RS05615
Fumarylacetoacetase:
4-fumaryl-acetoacetate + H2O→acetoacetate + fumarate + H+
(EC 3.7.1.2)
HSERO_RS05610

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information