MetaCyc Pathway: pyrimidine deoxyribonucleotide phosphorylation in Herbaspirillum seropedicae SmR1

Add experiment(s):


T(2)-induced deoxynucleotide kinase:
dTMP + ATP→dTDP + ADP (EC 2.7.4.12; 2.7.4.13; 2.7.4.9)
HSERO_RS13020
HSERO_RS16755
(Deoxy)nucleoside-phosphate kinase:
dCMP + ATP→dCDP + ADP (EC 2.7.4.13; 2.7.4.14; 2.7.4.25)
HSERO_RS18415
Nucleoside-diphosphate kinase:
dCDP + ATP→dCTP + ADP (EC 2.7.4.6)
HSERO_RS05880
HSERO_RS14815
Nucleoside-diphosphate kinase:
dTDP + ATP→dTTP + ADP (EC 2.7.4.6)
HSERO_RS05880
HSERO_RS14815

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information