MetaCyc Pathway: L-phenylalanine biosynthesis I in Herbaspirillum seropedicae SmR1

Add experiment(s):


Chorismate mutase:
chorismate→prephenate (EC 5.4.99.5)
HSERO_RS02155
HSERO_RS18430
Prephenate dehydratase:
prephenate + H+→3-phenyl-2-oxopropanoate + CO2 + H2O (EC 4.2.1.51)
HSERO_RS18430
HSERO_RS21785
Aspartate transaminase (in reverse):
3-phenyl-2-oxopropanoate + L-glutamate→L-phenylalanine + 2-oxoglutarate (EC 2.6.1.1; 2.6.1.27; 2.6.1.57)
HSERO_RS05425
HSERO_RS08395
HSERO_RS08705
HSERO_RS09025
HSERO_RS10455
HSERO_RS12210
HSERO_RS14160
HSERO_RS15115
HSERO_RS15220
HSERO_RS15835
HSERO_RS17885
HSERO_RS20335
HSERO_RS22025
HSERO_RS23235
HSERO_RS23520

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information