MetaCyc Pathway: superpathway of plastoquinol biosynthesis in Dyella japonica UNC79MFTsu3.2

geranyl diphosphate + 7 3-methylbut-3-en-1-yl diphosphate→all-trans-nonaprenyl diphosphate + 7 diphosphate (EC 2.5.1.84)

No genes

Aspartate transaminase: L-tyrosine + 2-oxoglutarate→3-(4-hydroxyphenyl)pyruvate + L-glutamate (EC 2.6.1.1; 2.6.1.27; 2.6.1.5; 2.6.1.57)

ABZR86_RS01145

ABZR86_RS02120

ABZR86_RS03710

ABZR86_RS04055

ABZR86_RS06725

ABZR86_RS08550

ABZR86_RS11705

ABZR86_RS12435

ABZR86_RS14075

ABZR86_RS16490

ABZR86_RS17110

ABZR86_RS20415

4-hydroxyphenylpyruvate dioxygenase: 3-(4-hydroxyphenyl)pyruvate + dioxygen→homogentisate + CO2 (EC 1.13.11.27)

ABZR86_RS18470

all-trans-nonaprenyl diphosphate + homogentisate + H+→2-methyl-6-all-trans-nonaprenyl-1,4-benzoquinol + CO2 + diphosphate (EC 2.5.1.117)

No genes

2-methyl-6-all-trans-nonaprenyl-1,4-benzoquinol + S-adenosyl-L-methionine→plastoquinol-9 + S-adenosyl-L-homocysteine + H+ (EC 2.1.1.295)

No genes

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information