MetaCyc Pathway: oxalate degradation III in Desulfovibrio vulgaris Hildenborough JW710
| Oxalate CoA-transferase: oxalate + succinyl-CoA→oxalyl-CoA + succinate (EC 2.8.3.2) |
| No genes |
| Glyoxylate dehydrogenase (acylating) (in reverse): oxalyl-CoA + NADPH + H+→glyoxylate + coenzyme A + NADP+ (EC 1.2.1.17) |
| No genes |
| Oxalyl-CoA decarboxylase: oxalyl-CoA + H+→CO2 + formyl-CoA (EC 4.1.1.8) |
| No genes |
| Formyl-CoA hydrolase: formyl-CoA + H2O→formate + coenzyme A + H+ (EC 3.1.2.10) |
| No genes |
| formate + NAD+→CO2 + NADH (EC 1.17.1.9) |
| DVU1611 |
| DVU2481 (fdoH) |
| DVU2482 (fdnG-2) |
| DVU2811 |
| DVU0578 |
| DVU0587 (fdnG-1) |
| DVU0588 (hybA) |
Links:
- Pathway details at MetaCyc
- Fitness data for 7 genes
- All MetaCyc pathways for Desulfovibrio vulgaris Hildenborough JW710
Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information