MetaCyc Pathway: pseudouridine degradation in Desulfovibrio vulgaris Hildenborough JW710
| Pseudouridine kinase: pseudouridine + ATP→pseudouridine 5'-phosphate + ADP + H+ (EC 2.7.1.83) |
| No genes |
| Pseudouridylate synthase (in reverse): pseudouridine 5'-phosphate + H2O→uracil + D-ribofuranose 5-phosphate (EC 4.2.1.70) |
| DVU0911 (truA) |
| DVU1024 (rluD/coaE) |
| DVU2678 |
| DVU3191 (rluC) |
| DVU0505 (truB) |
Links:
- Pathway details at MetaCyc
- Fitness data for 5 genes
- All MetaCyc pathways for Desulfovibrio vulgaris Hildenborough JW710
Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information