| a 2,3,4-saturated fatty acid + ATP + coenzyme A→a 2,3,4-saturated fatty acyl CoA + AMP + diphosphate |
| No genes |
Acyl-CoA oxidase:
a 2,3,4-saturated fatty acyl CoA + dioxygen→a (2E)-2-enoyl-CoA + hydrogen peroxide (EC 1.3.3.6) |
| No genes |
Enoyl-CoA hydratase (in reverse):
a (2E)-2-enoyl-CoA + H2O→a 2,3,4-saturated (3S)-3-hydroxyacyl-CoA (EC 4.2.1.17) |
| ABIE53_000611 |
| ABIE53_000784 |
| ABIE53_000786 |
| ABIE53_000906 |
| ABIE53_001500 |
| ABIE53_001617 |
| ABIE53_001618 |
| ABIE53_001839 |
| ABIE53_001912 |
| ABIE53_001964 |
| ABIE53_002151 |
| ABIE53_002574 |
| ABIE53_002640 |
| ABIE53_002879 |
| ABIE53_002890 |
| ABIE53_003141 |
| ABIE53_003629 |
| ABIE53_003632 |
| ABIE53_003913 |
| ABIE53_004511 |
| ABIE53_004556 |
| ABIE53_005545 |
| ABIE53_005601 |
| ABIE53_005736 |
| ABIE53_005737 |
| ABIE53_005844 |
| ABIE53_005862 |
| ABIE53_006341 |
3-hydroxyacyl-CoA dehydrogenase:
a 2,3,4-saturated (3S)-3-hydroxyacyl-CoA + NAD+→a 2,3,4-saturated 3-oxoacyl-CoA + NADH + H+ (EC 1.1.1.35) |
| ABIE53_000784 |
| ABIE53_001618 |
| ABIE53_002151 |
| ABIE53_002890 |
| ABIE53_004742 |
| ABIE53_005415 |
Acetyl-CoA C-acyltransferase (in reverse):
a 2,3,4-saturated 3-oxoacyl-CoA + coenzyme A→a 2,3,4-saturated fatty acyl CoA + acetyl-CoA (EC 2.3.1.16) |
| ABIE53_000590 |
| ABIE53_000785 |
| ABIE53_002065 |
| ABIE53_002071 |
| ABIE53_002152 |
| ABIE53_002419 |
| ABIE53_003631 |
| ABIE53_005177 |
| ABIE53_005414 |
Citrate (Si)-synthase:
acetyl-CoA + oxaloacetate + H2O→citrate + coenzyme A + H+ (EC 2.3.3.1; 2.3.3.16; 2.3.3.3) |
| ABIE53_003333 |
| ABIE53_004770 |
Aconitate hydratase:
citrate→cis-aconitate + H2O (EC 4.2.1.3) |
| ABIE53_004757 |
| ABIE53_004758 |
| ABIE53_005043 |
Aconitate hydratase:
cis-aconitate + H2O→D-threo-isocitrate (EC 4.2.1.3) |
| ABIE53_004757 |
| ABIE53_004758 |
| ABIE53_005043 |
Isocitrate lyase:
D-threo-isocitrate→glyoxylate + succinate (EC 4.1.3.1) |
| ABIE53_002536 |
Malate synthase:
acetyl-CoA + glyoxylate + H2O→(S)-malate + coenzyme A + H+ (EC 2.3.3.9) |
| ABIE53_002201 |
| ABIE53_002540 |
Succinate dehydrogenase (ubiquinone):
succinate[in] + an electron-transfer quinone→fumarate[in] + an electron-transfer quinol (EC 1.3.5.1) |
| ABIE53_004767 |
| ABIE53_004880 |
Fumarate hydratase (in reverse):
fumarate + H2O→(S)-malate (EC 4.2.1.2) |
| ABIE53_001662 |
| ABIE53_003084 |
Malate dehydrogenase:
(S)-malate + NAD+→oxaloacetate + NADH + H+ (EC 1.1.1.37; 1.1.1.38) |
| ABIE53_004763 |
| ABIE53_005860 |
| ABIE53_005861 |
Phosphoenolpyruvate carboxykinase (ATP):
oxaloacetate + ATP→phosphoenolpyruvate + ADP + CO2 (EC 4.1.1.49) |
| No genes |
Links:
Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information