MetaCyc Pathway: superpathway of plastoquinol biosynthesis in Paraburkholderia bryophila 376MFSha3.1

Add experiment(s):


geranyl diphosphate + 7 3-methylbut-3-en-1-yl diphosphate→all-trans-nonaprenyl diphosphate + 7 diphosphate (EC 2.5.1.84)
No genes
Aspartate transaminase:
L-tyrosine + 2-oxoglutarate→3-(4-hydroxyphenyl)pyruvate + L-glutamate (EC 2.6.1.1; 2.6.1.27; 2.6.1.5; 2.6.1.57)
H281DRAFT_00273
H281DRAFT_00432
H281DRAFT_00809
H281DRAFT_00920
H281DRAFT_01048
H281DRAFT_01557
H281DRAFT_01577
H281DRAFT_01667
H281DRAFT_01831
H281DRAFT_01942
H281DRAFT_02293
H281DRAFT_02875
H281DRAFT_02907
H281DRAFT_03132
H281DRAFT_03686
H281DRAFT_03705
H281DRAFT_03924
H281DRAFT_04024
H281DRAFT_04101
H281DRAFT_04597
H281DRAFT_04974
H281DRAFT_05051
H281DRAFT_05099
H281DRAFT_05339
H281DRAFT_05564
H281DRAFT_05654
H281DRAFT_05880
H281DRAFT_06094
H281DRAFT_06439
4-hydroxyphenylpyruvate dioxygenase:
3-(4-hydroxyphenyl)pyruvate + dioxygen→homogentisate + CO2 (EC 1.13.11.27)
H281DRAFT_03214
H281DRAFT_03867
H281DRAFT_05849
all-trans-nonaprenyl diphosphate + homogentisate + H+→2-methyl-6-all-trans-nonaprenyl-1,4-benzoquinol + CO2 + diphosphate (EC 2.5.1.117)
No genes
2-methyl-6-all-trans-nonaprenyl-1,4-benzoquinol + S-adenosyl-L-methionine→plastoquinol-9 + S-adenosyl-L-homocysteine + H+ (EC 2.1.1.295)
No genes

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information