| a 2,3,4-saturated fatty acid + ATP + coenzyme A→a 2,3,4-saturated fatty acyl CoA + AMP + diphosphate |
| No genes |
Acyl-CoA oxidase:
a 2,3,4-saturated fatty acyl CoA + dioxygen→a (2E)-2-enoyl-CoA + hydrogen peroxide (EC 1.3.3.6) |
| No genes |
Enoyl-CoA hydratase (in reverse):
a (2E)-2-enoyl-CoA + H2O→a 2,3,4-saturated (3S)-3-hydroxyacyl-CoA (EC 4.2.1.17) |
| H281DRAFT_00361 |
| H281DRAFT_00373 |
| H281DRAFT_00653 |
| H281DRAFT_00756 |
| H281DRAFT_00916 |
| H281DRAFT_01137 |
| H281DRAFT_01179 |
| H281DRAFT_01187 |
| H281DRAFT_01199 |
| H281DRAFT_01200 |
| H281DRAFT_01276 |
| H281DRAFT_01670 |
| H281DRAFT_01774 |
| H281DRAFT_02068 |
| H281DRAFT_02497 |
| H281DRAFT_02514 |
| H281DRAFT_02515 |
| H281DRAFT_02677 |
| H281DRAFT_02741 |
| H281DRAFT_02927 |
| H281DRAFT_03491 |
| H281DRAFT_03701 |
| H281DRAFT_03739 |
| H281DRAFT_03908 |
| H281DRAFT_04594 |
| H281DRAFT_04595 |
| H281DRAFT_04625 |
| H281DRAFT_04627 |
| H281DRAFT_04744 |
| H281DRAFT_05516 |
| H281DRAFT_05722 |
| H281DRAFT_05725 |
| H281DRAFT_05977 |
3-hydroxyacyl-CoA dehydrogenase:
a 2,3,4-saturated (3S)-3-hydroxyacyl-CoA + NAD+→a 2,3,4-saturated 3-oxoacyl-CoA + NADH + H+ (EC 1.1.1.35) |
| H281DRAFT_00361 |
| H281DRAFT_00916 |
| H281DRAFT_03517 |
| H281DRAFT_04595 |
| H281DRAFT_04625 |
| H281DRAFT_06131 |
Acetyl-CoA C-acyltransferase (in reverse):
a 2,3,4-saturated 3-oxoacyl-CoA + coenzyme A→a 2,3,4-saturated fatty acyl CoA + acetyl-CoA (EC 2.3.1.16) |
| H281DRAFT_00852 |
| H281DRAFT_00857 |
| H281DRAFT_00917 |
| H281DRAFT_01504 |
| H281DRAFT_02089 |
| H281DRAFT_04626 |
| H281DRAFT_05130 |
| H281DRAFT_05559 |
| H281DRAFT_05723 |
| H281DRAFT_06132 |
Citrate (Si)-synthase:
acetyl-CoA + oxaloacetate + H2O→citrate + coenzyme A + H+ (EC 2.3.3.1; 2.3.3.16; 2.3.3.3) |
| H281DRAFT_04099 |
| H281DRAFT_05547 |
| H281DRAFT_06117 |
Aconitate hydratase:
citrate→cis-aconitate + H2O (EC 4.2.1.3) |
| H281DRAFT_02981 |
| H281DRAFT_06210 |
| H281DRAFT_06606 |
Aconitate hydratase:
cis-aconitate + H2O→D-threo-isocitrate (EC 4.2.1.3) |
| H281DRAFT_02981 |
| H281DRAFT_06210 |
| H281DRAFT_06606 |
Isocitrate lyase:
D-threo-isocitrate→glyoxylate + succinate (EC 4.1.3.1) |
| H281DRAFT_00580 |
| H281DRAFT_00986 |
Malate synthase:
acetyl-CoA + glyoxylate + H2O→(S)-malate + coenzyme A + H+ (EC 2.3.3.9) |
| H281DRAFT_00576 |
| H281DRAFT_00963 |
Succinate dehydrogenase (ubiquinone):
succinate[in] + an electron-transfer quinone→fumarate[in] + an electron-transfer quinol (EC 1.3.5.1) |
| No genes |
Fumarate hydratase (in reverse):
fumarate + H2O→(S)-malate (EC 4.2.1.2) |
| H281DRAFT_00025 |
| H281DRAFT_02592 |
| H281DRAFT_04314 |
| H281DRAFT_04956 |
Malate dehydrogenase:
(S)-malate + NAD+→oxaloacetate + NADH + H+ (EC 1.1.1.37; 1.1.1.38) |
| H281DRAFT_00026 |
| H281DRAFT_02928 |
| H281DRAFT_05436 |
| H281DRAFT_06632 |
Phosphoenolpyruvate carboxykinase (ATP):
oxaloacetate + ATP→phosphoenolpyruvate + ADP + CO2 (EC 4.1.1.49) |
| No genes |
Links:
Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information