MetaCyc Pathway: superpathway of L-citrulline metabolism in Paraburkholderia bryophila 376MFSha3.1

Add experiment(s):


Glutamate synthase (NADPH):
L-glutamine + H2O→L-glutamate + ammonia + H+
(EC 1.4.1.13; 1.4.1.14; 1.4.7.1; 2.6.1.85; 3.5.1.2; 3.5.1.38; 4.1.3.27; 4.3.2.10; 4.3.3.6; 6.3.4.2; 6.3.5.13; 6.3.5.2; 6.3.5.4; 6.3.5.5; 6.3.5.6; 6.3.5.7)
H281DRAFT_00378
H281DRAFT_00495
H281DRAFT_00637
H281DRAFT_01685
H281DRAFT_02165
H281DRAFT_02220
H281DRAFT_02221
H281DRAFT_02222
H281DRAFT_02364
H281DRAFT_03243
H281DRAFT_03954
H281DRAFT_03959
H281DRAFT_04402
H281DRAFT_04403
H281DRAFT_04650
H281DRAFT_04702
H281DRAFT_05620
H281DRAFT_05621
H281DRAFT_05714
H281DRAFT_05715
H281DRAFT_05933
H281DRAFT_05994
H281DRAFT_06113
Carbamoyl-phosphate synthase (ammonia):
ammonium + 2 ATP + hydrogen carbonate→carbamoyl phosphate + 2 ADP + 2 H+ + phosphate
(EC 6.3.4.16)
No genes
L-proline[in] + an electron-transfer quinone→(S)-1-pyrroline-5-carboxylate[in] + an electron-transfer quinol + H+[in] (EC 1.5.5.2)
H281DRAFT_02404
Glutamate 5-kinase:
L-glutamate + ATP→γ-L-glutamyl 5-phosphate + ADP
(EC 2.7.2.11)
H281DRAFT_06264
(S)-1-pyrroline-5-carboxylate + H+ + H2O→L-glutamate 5-semialdehyde (spontaneous)
No genes
Glutamate-5-semialdehyde dehydrogenase (in reverse):
γ-L-glutamyl 5-phosphate + NADPH + H+→L-glutamate 5-semialdehyde + NADP+ + phosphate
(EC 1.2.1.41)
H281DRAFT_06324
Ornithine aminotransferase (in reverse):
L-glutamate + L-glutamate 5-semialdehyde→L-ornithine + 2-oxoglutarate
(EC 2.6.1.13)
H281DRAFT_06478
Ornithine carbamoyltransferase:
L-ornithine + carbamoyl phosphate→L-citrulline + H+ + phosphate
(EC 2.1.3.3)
H281DRAFT_04119
Argininosuccinate synthase:
L-citrulline + ATP + L-aspartate→L-arginino-succinate + AMP + diphosphate + H+
(EC 6.3.4.5)
H281DRAFT_04120
Argininosuccinate lyase:
L-arginino-succinate→L-arginine + fumarate
(EC 4.3.2.1)
H281DRAFT_00194
Arginase:
L-arginine + H2O→L-ornithine + urea
(EC 3.5.3.1)
No genes
Nitric-oxide synthase:
2 L-arginine + 3 NADPH + 4 dioxygen + H+→2 L-citrulline + 3 NADP+ + 2 nitric oxide + 4 H2O
(EC 1.14.13.39)
No genes

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information