MetaCyc Pathway: ureide biosynthesis in Burkholderia phytofirmans PsJN

Add experiment(s):


IMP dehydrogenase:
IMP + NAD+ + H2O→XMP + NADH + H+ (EC 1.1.1.205)
BPHYT_RS10250
BPHYT_RS12020
BPHYT_RS13715
BPHYT_RS24710
BPHYT_RS27545
BPHYT_RS31260
5'-nucleotidase:
XMP + H2O→xanthosine + phosphate (EC 3.1.3.5)
BPHYT_RS01605
BPHYT_RS03140
BPHYT_RS09100
BPHYT_RS26570
Purine-nucleoside phosphorylase:
xanthosine + phosphate→xanthine + α-D-ribose-1-phosphate (EC 2.4.2.1)
No genes
Xanthine dehydrogenase:
xanthine + NAD+ + H2O→urate + NADH + H+ (EC 1.17.1.4)
BPHYT_RS03865
BPHYT_RS03870
BPHYT_RS10825
BPHYT_RS15080
BPHYT_RS15085
BPHYT_RS20910
BPHYT_RS20915
BPHYT_RS24595
BPHYT_RS29710
BPHYT_RS29715
Urate oxidase:
urate + dioxygen + H2O→(S)-5-hydroxyisourate + hydrogen peroxide (EC 1.7.3.3)
BPHYT_RS11550
BPHYT_RS11555
BPHYT_RS26115
Hydroxyisourate hydrolase:
(S)-5-hydroxyisourate + H2O→(S)-2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline + H+ (EC 3.5.2.17)
BPHYT_RS11530
(S)-2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline + H+→(S)-(+)-allantoin + CO2 (EC 4.1.1.97)
No genes

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information