MetaCyc Pathway: Escherichia coli serotype O:52 O antigen biosynthesis in Burkholderia phytofirmans PsJN

Add experiment(s):


UDP-N-acetyl-α-D-glucosamine + di-trans,octa-cis-undecaprenyl phosphate→α-D-GlcNAc-PP-Und + UMP (EC 2.7.8.33)
BPHYT_RS04380
BPHYT_RS04390
BPHYT_RS23395
α-D-GlcNAc-PP-Und + GDP-6-deoxy-α-D-manno-heptose→β-6DManHep-(1→3)-α-D-GlcNAc-PP-undecaprenol + GDP + H+
No genes
β-6DManHep-(1→3)-α-D-GlcNAc-PP-undecaprenol + dTDP-β-D-fucofuranose→β-D-Fucf-(1→3)-β-6DManHep-(1→3)-α-D-GlcNAc-PP-undecaprenol + H+ + dTDP
No genes
GDP-6-deoxy-α-D-manno-heptose + β-D-Fucf-(1→3)-β-6DManHep-(1→3)-α-D-GlcNAc-PP-undecaprenol→β-6DManHep-(1→3)-β-D-Fucf-(1→3)-β-6DManHep-(1→3)-α-D-GlcNAc-PP-undecaprenol + GDP + H+
No genes
dTDP-β-D-fucofuranose + β-6DManHep-(1→3)-β-D-Fucf-(1→3)-β-6DManHep-(1→3)-α-D-GlcNAc-PP-undecaprenol→β-D-Fucf-(1→3)-β-6DManHep-(1→3)-β-D-Fucf-(1→3)-β-6DManHep-(1→3)-α-D-GlcNAc-PP-undecaprenol + H+ + dTDP
No genes
dTDP-β-D-fucofuranose + [β-D-Fucf-(1→3)-β-6DManHep-(1→3)]n-α-D-GlcNAc-PP-undecaprenol→α-D-Fucf-(1→3)-[β-D-Fucf-(1→3)-β-6DManHep-(1→3)]n-α-D-GlcNAc-PP-undecaprenol + H+ + dTDP
No genes
α-D-Fucf-(1→3)-[β-D-Fucf-(1→3)-β-6DManHep-(1→3)]n-α-D-GlcNAc-PP-undecaprenol + S-adenosyl-L-methionine→Escherichia coli serotype O:52 O antigen + S-adenosyl-L-homocysteine + H+
No genes
Escherichia coli serotype O:52 O antigen[in] + ATP[out] + H2O[in]→Escherichia coli serotype O:52 O antigen[out] + ADP[in] + H+[in] + phosphate[in]
No genes

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information