MetaCyc Pathway: limonene degradation IV (anaerobic) in Burkholderia phytofirmans PsJN

Add experiment(s):


limonene + an oxidized electron carrier + H2O→perillyl alcohol + a reduced two electron carrier (EC 1.17.99.8)
No genes
Perillyl-alcohol dehydrogenase:
perillyl alcohol + NAD+→perillyl aldehyde + NADH + H+
(EC 1.1.1.144)
No genes
Aldehyde dehydrogenase (NAD(+)):
perillyl aldehyde + NAD+ + H2O→perillate + NADH + 2 H+
(EC 1.2.1.3)
BPHYT_RS00120
BPHYT_RS00395
BPHYT_RS05370
BPHYT_RS07490
BPHYT_RS09900
BPHYT_RS17340
BPHYT_RS18745
BPHYT_RS19710
BPHYT_RS20795
BPHYT_RS25705
BPHYT_RS25810
BPHYT_RS27405
BPHYT_RS28770
BPHYT_RS29875
BPHYT_RS30510
BPHYT_RS32650
BPHYT_RS34980
BPHYT_RS35600
perillate + ATP + coenzyme A→perillyl-CoA + AMP + diphosphate (EC 6.2.1.M31)
No genes
perillyl-CoA + H2O→2-hydroxy-4-isopropenylcyclohexane-1-carboxyl-CoA
No genes
2-hydroxy-4-isopropenylcyclohexane-1-carboxyl-CoA + NAD+→2-oxo-4-Isopropenylcyclohexane-1-carboxyl-CoA + NADH + H+
No genes
2-oxo-4-Isopropenylcyclohexane-1-carboxyl-CoA + H2O→4-(isopropenyl)pimeloyl-CoA + H+
No genes

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information