MetaCyc Pathway: chorismate biosynthesis from 3-dehydroquinate in Burkholderia phytofirmans PsJN

Add experiment(s):


3-dehydroquinate dehydratase:
3-dehydroquinate→3-dehydroshikimate + H2O (EC 4.2.1.10)
BPHYT_RS12675
BPHYT_RS17005
BPHYT_RS20430
BPHYT_RS22680
BPHYT_RS27380
BPHYT_RS28845
Shikimate dehydrogenase (in reverse):
3-dehydroshikimate + NADPH + H+→shikimate + NADP+ (EC 1.1.1.25)
BPHYT_RS16975
BPHYT_RS22685
BPHYT_RS27375
BPHYT_RS28720
BPHYT_RS30065
Shikimate kinase:
shikimate + ATP→shikimate 3-phosphate + ADP + H+ (EC 2.7.1.71)
BPHYT_RS13350
BPHYT_RS17890
3-phosphoshikimate 1-carboxyvinyltransferase:
shikimate 3-phosphate + phosphoenolpyruvate→5-enolpyruvoyl-shikimate 3-phosphate + phosphate (EC 2.5.1.19)
BPHYT_RS14895
Chorismate synthase:
5-enolpyruvoyl-shikimate 3-phosphate→chorismate + phosphate (EC 4.2.3.5)
BPHYT_RS13705

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information