MetaCyc Pathway: superpathway of plastoquinol biosynthesis in Burkholderia phytofirmans PsJN

Add experiment(s):


geranyl diphosphate + 7 3-methylbut-3-en-1-yl diphosphate→all-trans-nonaprenyl diphosphate + 7 diphosphate (EC 2.5.1.84)
No genes
Aspartate transaminase:
L-tyrosine + 2-oxoglutarate→3-(4-hydroxyphenyl)pyruvate + L-glutamate (EC 2.6.1.1; 2.6.1.27; 2.6.1.5; 2.6.1.57)
BPHYT_RS00155
BPHYT_RS02830
BPHYT_RS04100
BPHYT_RS05430
BPHYT_RS05975
BPHYT_RS06770
BPHYT_RS06900
BPHYT_RS08040
BPHYT_RS08950
BPHYT_RS09580
BPHYT_RS10265
BPHYT_RS10440
BPHYT_RS13065
BPHYT_RS13450
BPHYT_RS14905
BPHYT_RS15405
BPHYT_RS15820
BPHYT_RS17705
BPHYT_RS21060
BPHYT_RS21560
BPHYT_RS21610
BPHYT_RS21730
BPHYT_RS22065
BPHYT_RS22425
BPHYT_RS26535
BPHYT_RS26755
BPHYT_RS27000
BPHYT_RS28370
BPHYT_RS28685
BPHYT_RS28695
BPHYT_RS30590
BPHYT_RS30680
BPHYT_RS32285
BPHYT_RS32640
BPHYT_RS35285
4-hydroxyphenylpyruvate dioxygenase:
3-(4-hydroxyphenyl)pyruvate + dioxygen→homogentisate + CO2 (EC 1.13.11.27)
BPHYT_RS18295
BPHYT_RS22675
BPHYT_RS33445
all-trans-nonaprenyl diphosphate + homogentisate + H+→2-methyl-6-all-trans-nonaprenyl-1,4-benzoquinol + CO2 + diphosphate (EC 2.5.1.117)
No genes
2-methyl-6-all-trans-nonaprenyl-1,4-benzoquinol + S-adenosyl-L-methionine→plastoquinol-9 + S-adenosyl-L-homocysteine + H+ (EC 2.1.1.295)
No genes

Links:

Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information