MetaCyc Pathway: aromatic compounds degradation via β-ketoadipate in Burkholderia phytofirmans PsJN

Add experiment(s):


Catechol 1,2-dioxygenase:
catechol + dioxygencis,cis-muconate + 2 H+
(EC 1.13.11.1)
BPHYT_RS07850
BPHYT_RS10670
BPHYT_RS20450
Protocatechuate 3,4-dioxygenase:
protocatechuate + dioxygen→3-carboxy-cis,cis-muconate + 2 H+
(EC 1.13.11.3)
BPHYT_RS33455
BPHYT_RS33460
3-carboxy-cis,cis-muconate cycloisomerase (in reverse):
3-carboxy-cis,cis-muconate + H+→(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate
(EC 5.5.1.2)
BPHYT_RS21425
Muconate cycloisomerase (in reverse):
cis,cis-muconate + H+→(+)-muconolactone
(EC 5.5.1.1)
BPHYT_RS07840
BPHYT_RS10675
4-carboxymuconolactone decarboxylase:
(2-carboxy-2,5-dihydro-5-oxofuran-2-yl)-acetate + H+→(4,5-dihydro-5-oxofuran-2-yl)-acetate + CO2
(EC 4.1.1.44)
BPHYT_RS09010
BPHYT_RS21435
BPHYT_RS27085
BPHYT_RS27165
BPHYT_RS28360
BPHYT_RS28365
Muconolactone Delta-isomerase:
(+)-muconolactone→(4,5-dihydro-5-oxofuran-2-yl)-acetate
(EC 5.3.3.4)
BPHYT_RS07835
BPHYT_RS10665
3-oxoadipate enol-lactonase:
(4,5-dihydro-5-oxofuran-2-yl)-acetate + H2O→3-oxoadipate + H+
(EC 3.1.1.24)
BPHYT_RS02320
BPHYT_RS21430
BPHYT_RS34955
3-oxoadipate CoA-transferase:
3-oxoadipate + succinyl-CoA→3-oxoadipoyl-CoA + succinate
(EC 2.8.3.6)
BPHYT_RS21415
BPHYT_RS21420
3-oxoadipyl-CoA thiolase (in reverse):
3-oxoadipoyl-CoA + coenzyme A→acetyl-CoA + succinyl-CoA
(EC 2.3.1.174)
BPHYT_RS17345
BPHYT_RS29385

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Candidate genes for each reaction are identified from best hits to MetaCyc; by matching EC numbers (which are assigned by TIGRFam, SEED, or best hits to KEGG); or by matching SEED roles to KEGG reactions to MetaCyc reactions. See the "Protein" tab of each gene for more information